KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1119
Entry
ECRM13516_1119    CDS       T03011                                 
Symbol
rutR
Name
(GenBank) Transcriptional regulator RutR (TetR family)
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecoh03000]
    ECRM13516_1119 (rutR)
Transcription factors [BR:ecoh03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    ECRM13516_1119 (rutR)
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29
Other DBs
NCBI-ProteinID: AHG13789
LinkDB
Position
1153804..1154442
AA seq 212 aa
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQQIIIEGIRPR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacgcaaggtgcagtgaaaacaacgggtaaacgttcgcgcgcagtcagtgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcagtgacaggcgcaacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcagattattattgaggggattcgaccacgttaa

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