Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1130
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Entry
ECRM13516_1130 CDS
T03011
Symbol
pgaD
Name
(GenBank) Biofilm PGA synthesis auxiliary protein PgaD
KO
K11937
biofilm PGA synthesis protein PgaD
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00543
Exopolysaccharide biosynthesis
ecoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
ECRM13516_1130 (pgaD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECRM13516_1130 (pgaD)
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Motif
Pfam:
PgaD
ECF_trnsprt
SfLAP
Chordopox_A13L
Herpes_LMP1
Motif
Other DBs
NCBI-ProteinID:
AHG13800
LinkDB
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Position
complement(1167701..1168114)
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AA seq
137 aa
AA seq
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MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLL
AVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFT
SQGQIKMVVSEKALVRA
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttaattattacgacccgacaatcgccagtacgtttactggttgattatgtt
gccacaaccatcttgtggacattatttgctttgttcatattcttattcgccatggatctg
ctgacgggttattactggcaaagcgaggcccgaagccgacttcagttctattttttgctg
gcagtggcgaatgccgtcgtgttaattgtctgggcgctgtacaataagctgcgttttcaa
aaacagcagcatcatgcagcctaccaatatacgccgcaagaatatgcagagagcttagca
atacctgatgagctctatcagcaactacaaaaaagccacaggatgagcgtacacttcacc
agccaggggcaaataaaaatggtggtttcagaaaaagcgctagtccgggcataa
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