Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1257
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Entry
ECRM13516_1257 CDS
T03011
Name
(GenBank) Antigen 43 precursor
KO
K12687
antigen 43
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECRM13516_1257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_1257
02044 Secretion system [BR:
ecoh02044
]
ECRM13516_1257
Transporters [BR:
ecoh02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13516_1257
Secretion system [BR:
ecoh02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
ECRM13516_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AHG13928
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All DBs
Position
1291871..1293331
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AA seq
486 aa
AA seq
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MVLNGDVVSTGDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKLTTTNLTGQGGTIN
MRVRLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEG
AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSH
QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT
TGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKA
SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG
SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDM
SMGTAAAGSNMTFSPSRNGTSLDLQAGLEARIRENITLGVQAGYAHSVSGSSAEGYNGQA
TLNMTF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtactgaatggtgatgtggtcagtaccggcgatattgttaacgcaggggagattcgc
tttgataatcagacgacaccgaatgccgcgctgagccgtgctgttgcaaaaagtaactcc
ccggtaacgttccataaactgaccaccacgaacctcaccggccagggcggcaccatcaat
atgcgtgttcgccttgatggcagcaatgcctctgaccagctggtgattaatggtggtcag
gcaaccggcaaaacctggcttgcgtttacaaatgtcggaaacagcaacctcggggtggca
accaccggacagggtatccgggttgtggatgcacagaatggcgccaccacagaagaaggt
gcgtttgccctgagtcgcccgcttcaggccggcgcctttaactacaccctgaaccgtgac
agcgatgaagactggtacctgcgcagtgaaaatgcttatcgtgctgaagtccccctgtat
acatccatgttgacacaggcaatggactatgaccggattctggcaggctcccgcagccat
cagaccggtgtaaacggtgaaaataacagcgtccgtctcagcattcagggcggtcatctc
ggtcacgataacaacggcggtattgcccgtggagccacgccggaaagcagcggcagctat
ggcttcgtccgtctggagggtgacctgctcagaacagaggttgccggtatgtctctgacg
acaggggtgtatggtgctgcaggccattcttccgttgatgttaaggatgatgacggttcc
cgcgccggcacggtccgggatgatgccggcagtctgggcggatacctgaatctggtacac
acatcctccggcctgtgggctgacattgtggcccagggaacccgtcacagcatgaaagcg
tcatcggacaataacgacttccgcgcccggggctggggctggctgggctcactggaaacc
ggtctgcccttcagtatcactgacaatctgatgctggagccacaactgcagtacacctgg
cagggactctccctggatgacggccaggataacgccggttatgtgaagttcgggcatggc
agtgcacaacatgtgcgtgccggtttccgtctgggcagccacaacgatatgacctttggt
gaaggcacctcatcccgtgacaccctgcgcgacagtgcaaaacacagtgtgagtgaactg
ccggtgaactggtgggtacagccttctgttatccgcaccttcagctcccggggtgacatg
agcatggggacagccgcagccggcagtaacatgacgttctcaccgtcccggaatggcacg
tcactggacctgcaggccggactggaagcccgtatccgggaaaatatcaccctgggcgtt
caggccggttatgcccacagcgtcagcggcagcagcgctgaaggctataacggtcaggct
acgctgaatatgactttctga
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