Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1653
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Entry
ECRM13516_1653 CDS
T03011
Symbol
yciL_2
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoh03009
]
ECRM13516_1653 (yciL_2)
Enzymes [BR:
ecoh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ECRM13516_1653 (yciL_2)
Ribosome biogenesis [BR:
ecoh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECRM13516_1653 (yciL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHG14320
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All DBs
Position
1627861..1628736
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AA seq
291 aa
AA seq
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MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVR
ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYL
RELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQMSGGRRSGGRNNNG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagctacagaaagtgctggcgcgtgccggccacggttctcgccgtgaaatc
gaatctattattgaagccggtcgtgtgagtgttgatggcaaaattgctaaactcggcgat
cgtgttgaagttacccctggattgaaaatccgtatcgatggtcacctgatttcggtacgt
gagtccgctgaacaaatttgtcgcgttctggcctattacaaaccggaaggtgagttgtgt
acccgtaacgatccggaaggacgtccaacggtgtttgaccgtctgccaaaactgcgtggc
gcacgctggattgccgtgggtcgcttggacgttaatacctgtggtctgctgctgttcacc
accgatggtgaactggcaaaccgtttaatgcacccaagccgtgaagttgaacgtgaatat
gccgtgcgtgtatttggtcaggttgacgacgcgaaactgcgtgatttgagtcgtggcgtg
cagttggaagatggtccggcagcttttaaaaccatcaagttcagcggcggcgaagggatc
aaccagtggtacaacgtgactctgaccgaaggccgtaaccgtgaagttcgtcgtctgtgg
gaagcggttggtgtgcaggtgagccgcctgatccgtgttcgttacggtgatatcccactg
ccaaaaggtctgccacgcggtggctggacggagctggacctcgcccagactaactatctg
cgcgaactggtggagctaccgccagaaaccagctctaaagtcgctgtagaaaaagaccgt
cgtcgcatgaaggcgaatcagattcgtcgtgcggtgaaacgtcacagtcagatgagcggc
ggtcgtcgttctggcggacgtaataataacggttaa
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