Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1690
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Entry
ECRM13516_1690 CDS
T03011
Symbol
ycjC
Name
(GenBank) Putrescine utilization regulator
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_1690 (ycjC)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECRM13516_1690 (ycjC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_2
HTH_3
HTH_31
HTH_19
HTH_26
AraC_binding
HTH_37
MqsA_antitoxin
MPI_cupin_dom
HTH_25
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
AHG14357
LinkDB
All DBs
Position
1670146..1670703
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AA seq
185 aa
AA seq
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MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
TPTTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagggactggcgccaggaaaacgcttgtcggaaatccgccagcagcagggg
ctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgata
gaacaagataaagtcagccctgccatcagtacgctgcaaaagctgctgaaggtgtatggt
ctgtcactctcggaattcttttccgagccggaaaaacctgatgagccgcaggtcgtcatt
aatcaggacgatttaattgagatgggcagtcagggtgtgtcaatgaagctggttcataac
ggtaacccgaatcgcacgctggcgatgatctttgaaacgtaccagccgggcacaaccacc
ggggaaagaattaagcatcagggtgaggaaataggcactgtactggaaggtgaaattgtt
ctgacgattaatggtcaggattaccacctcgtcgcggggcaaagttatgccattaatacc
ggcatcccgcacagtttcagtaatacgtcggcaggtatttgccgaattatcagcgcccat
acgcccaccacgttttaa
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