KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1738
Entry
ECRM13516_1738    CDS       T03011                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecoh03009]
    ECRM13516_1738 (dbpA)
Enzymes [BR:ecoh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     ECRM13516_1738 (dbpA)
Ribosome biogenesis [BR:ecoh03009]
 Prokaryotic type
  rRNA helicases
   ECRM13516_1738 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AHG14405
LinkDB
Position
1719431..1720804
AA seq 457 aa
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEALRANIISDML
QIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacgaaccttaatgag
ttgggttatttaactatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttgcaa
catgcgccgcatattatcgtggcaacgccggggcgtttgctggatcacctgcaaaaaggc
acggtatcactggatgcgttgaatacgctggtgatggatgaggccgaccgcatgctggat
atgggatttagcgatgccattgatgatgtcatccgttttgcgccagcatctcgacagacg
cttctgttttcggcaacctggccggaagccatcgccgcaatcagcggacgagtgcaacgc
gatcctttggcgattgaaattgactcaacagatgctttgccacccattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacgattattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagattgccaggctgtctgcgacgcg
ctgaatgaagtagggcaaagtgcattgtcattacacggcgatttggagcaacgcgatcgc
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatattaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctg
gcgatcagtttctgtgctccggaagaagcactgcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgccgccagctaatagttccattgtgacgctggaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcactgacaggagatatcgggcttgatggcgcagatattggcaaaatcgccgtg
catccggcgcatgtctatgtcgcggtccgtcaggctgttgctcataaagcatggaaacag
ttacagggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa

DBGET integrated database retrieval system