Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1828
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Entry
ECRM13516_1828 CDS
T03011
Symbol
nmpC
Name
(GenBank) Outer membrane porin protein NmpC precursor
KO
K16076
outer membrane porin protein LC
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_1828 (nmpC)
Transporters [BR:
ecoh02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13516_1828 (nmpC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
AHG14496
LinkDB
All DBs
Position
complement(1820128..1821228)
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AA seq
366 aa
AA seq
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MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLG
FKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNKTRLAYAGLKISEFGSLDYGRNYGVG
YDIGSWTDMLPEFGGDTWSQKDVFMTYRTTGVATYRNYDFFGLIEGLNFAAQYQGKNERT
DNSHLYGADYTRANGDGFGISSTYVYDGFGIGAVYTKSDRTNAQERAAANPLNASGKNAE
LWATGIKYDANNIYFAANYAETLNMTTYGDGYISNKAQSFEVVAQYQFDFGLRPSLAYLK
SKGRDLGRYGDQDMIEYIDVGATYFFNKNMSTYVDYKINLIDESDFTRAVDIRTDNIVAT
GITYQF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaatagttgcggtggttgtaactggtttgttagctgcgaacgtagcacac
gctgccgaagtctataacaaggatggtaataaactcgacctttatggcaaggttaccgct
ctacgttattttactgatgataagcgtgacgatggtgataaaacttatgcccgtctcggc
tttaaaggagaaacgcaaatcaatgatcaaatgattggttttggtcactgggaatatgat
tttaaaggctataacgatgaagccaacggctcgcgcggcaacaagacccgtctggcctat
gctggtttaaaaattagtgaatttggctctctggactatggtcgtaactacggtgtcggc
tatgacattggttcatggaccgatatgttgccagaatttggtggcgatacctggagtcag
aaagatgtcttcatgacataccgtaccaccggtgtagcaacctatcgcaactacgatttc
tttggcttaattgaagggctgaactttgccgcgcaatatcaaggcaaaaatgaacgtact
gacaacagtcatctttatggtgctgactacacgcgtgccaacggtgacggtttcggtatc
tcctcaacttatgtttatgatggctttggtatcggtgcggtatataccaaatccgatcgg
acaaatgcgcaggaaagagccgctgctaatcctctcaatgcctccggtaagaatgcagaa
ctgtgggccacaggtataaagtatgatgccaacaacatctactttgcagctaattacgct
gaaacattaaacatgaccacctatggggatggttatatctcgaacaaagcacaaagtttt
gaagtggtggcgcaatatcaattcgacttcggcttgcgcccatcactcgcttacctgaaa
tcgaaaggcagagatctgggccgctacggcgaccaggacatgattgagtatatcgacgtt
ggtgcgacgtatttcttcaacaaaaatatgtcgacctatgttgattataaaatcaacctg
attgatgaaagcgactttacccgtgccgtagatattcgcaccgataacatcgtcgcaacg
ggcattacctatcagttctaa
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