Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1880
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Entry
ECRM13516_1880 CDS
T03011
Symbol
lsrD
Name
(GenBank) Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
KO
K10557
AI-2 transport system permease protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02010
ABC transporters
ecoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECRM13516_1880 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECRM13516_1880 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_1880 (lsrD)
Transporters [BR:
ecoh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
ECRM13516_1880 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
AHG14548
LinkDB
All DBs
Position
1886598..1887590
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AA seq
330 aa
AA seq
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MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG
IDISFGSTIGLCAIALGVLFQSDVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITL
GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW
LHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL
GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL
LIVVVVGRSVSLHRQQIKEWLARRANNPLP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgctacggttgggaactggctcttgccgcactgctcgttattgagattgtc
gcatttggtgcaattaacccgcggatgttagatctcaatatgttgctgttcagcaccagt
gactttatctgcattggcattgtcgccctaccgctgacgatggtgattgtcagtggcggg
atcgatatttcgtttggttcgaccatcggcctctgcgccattgcattgggcgtactgttt
caaagtgatgtgccgatgccgctggcgattctcctgaccttactgctcggcgcattgtgc
gggctgatcaacgccggattaattatctataccaaagttaacccgctggtgattacgctt
ggcacgctgtatctgtttgctggaagcgctctgctgctttccgggatggccggagcgacg
gggtacgaaggtattggtggattcccgatggcgtttacagatttcgctaacctggatgtg
ctgggactccccgttccgctgattatcttcctgatatgtctcctcgttttctggctctgg
ctgcataaaacccatgccggacgtaatgtgtttttgattgggcaaagcccgcgcgtggcg
ctttatagcgcgattccagttaaccgcaccttatgtgcgctctatgccatgacggggctg
gcgtctgcggtcgccgctgtgctgctggtatcgtattttggttcagcacgttccgatctc
ggtgcgtcgtttctgatgcccgccatcaccgccgtggtgcttggcggggccaatatttat
ggtggttccggttccattatcggcaccgccattgcggttttattagtgggatatttgcaa
caaggtttgcaaatggcaggagtgccaaatcaggtgtccagcgccctttccggtgcgcta
cttatcgtcgttgtcgtaggtcgttccgttagcctgcatcgccagcaaattaaagagtgg
ctggcgcgtcgggccaataacccattgccataa
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