Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2236
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Entry
ECRM13516_2236 CDS
T03011
Symbol
kdgR
Name
(GenBank) Transcriptional regulator KdgR, KDG operon repressor
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_2236 (kdgR)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ECRM13516_2236 (kdgR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HTH_11
HTH_5
TrmB
MarR_2
HTH_26
Fe_dep_repress
Mga
Rrf2
HTH_45
MarR
FUR
HTH_6
PadR
HTH_34
Dimerisation2-like_dom
Motif
Other DBs
NCBI-ProteinID:
AHG14904
LinkDB
All DBs
Position
complement(2221628..2222419)
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AA seq
263 aa
AA seq
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MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY
VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISRLTKETIHLGALDEDSIVY
IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILEGVEYKRSTERTITST
EALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQE
YVAMLHTAARKISAQMGYHDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcagatctggataaacagcctgattctgtatcttccgtgctaaaagttttt
ggcattttgcaggcgctgggtgaagagcgcgaaatagggataaccgagctgtcgcagcgc
gtcatgatgtcaaaaagcaccgtttatcgctttttacagaccatgaaaaccttaggttat
gtggcgcaggaaggggagtcggagaaatattccctgaccctgaaattgtttgaactgggc
gctcgcgcgttacaaaacgtcgatttaattcgtagcgcagatatccagatgcgtgagatc
tcccgcctgaccaaagaaactatccacctcggcgcactggacgaagacagtattgtttac
attcacaaaattgactctatgtacaatttgcgcatgtattcacggattgggcgtcgtaat
ccgctgtacagcaccgcgattggtaaggtactgctagcatggcgcgatcgcgatgaagtg
aagcaaattcttgagggcgtggagtataaacgcagtaccgagcggaccatcaccagtaca
gaagcgttattacccgttctggaccaggtgcgcgagcaggggtatggcgaagataacgaa
gagcaggaagaagggctgcgatgcattgcggtaccggtatttgatcgctttggcgtggtc
attgccggtttgagcatctccttcccgacgttgcgtttctctgaagagcgtttacaggaa
tatgtcgcaatgttgcataccgcagcgcgcaaaatttctgcccaaatgggttatcacgac
tatccgttctga
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