Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2435
Help
Entry
ECRM13516_2435 CDS
T03011
Symbol
rcsA
Name
(GenBank) Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02020
Two-component system
ecoh02024
Quorum sensing
ecoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECRM13516_2435 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECRM13516_2435 (rcsA)
02026 Biofilm formation - Escherichia coli
ECRM13516_2435 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_2435 (rcsA)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ECRM13516_2435 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
AHG15097
LinkDB
All DBs
Position
2397689..2398312
Genome browser
AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH
DASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgtagttacacccgactaggtttaaccgggtatctg
ttgagtagaggggttaaaaaaagagaaatcaacgacattgaaaccgttgatgaccttgcc
atagcttgtgattcacagcgcccttcagtggtgtttattaatgaggactgtttcatccat
gatgcttctaacagtcagcgcatcaagcacatcattaatcaacatcccaatacgttattt
atcgtttttatggcaattgccaatgttcattttgatgaatatctattggtcagaaaaaat
ttattgatcagttctaaatcgattaaaccggaatctctcgacgatatccttggcgatatt
ctgaaaaaagagacaacgataacctcttttttaaatatgccgacgttatcattgagccga
accgaatcgagtatgttgcgaatgtggatggcaggtcagggaaccattcaaatctctgac
caaatgaatatcaaagccaagaccgtttcatcgcataaaggtaatattaaacgtaagatc
aaaacgcataataaacaggttatctaccatgtcgtccgactgacggataatgtgactaat
ggtatttttgtcaacatgcgctaa
DBGET
integrated database retrieval system
