KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2533
Entry
ECRM13516_2533    CDS       T03011                                 
Name
(GenBank) VgrG protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ECRM13516_2533
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_2533
Secretion system [BR:ecoh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ECRM13516_2533
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp44-like_2nd Phage_Mu_Gp45 T6SS_Vgr
Other DBs
NCBI-ProteinID: AHG15191
LinkDB
Position
2476203..2478317
AA seq 704 aa
MSQAGLRFTVDVDGQPTETFAVTRFHLSQSYFSLFTLEINTVSERTTLKASTLLEQTAQL
TIWQGSTPLRYVTGLIAGFERGEYDGRKTSYSLTVRPPLWRSSLRQNFRHFQQQDIQSII
QRLLDDNRVGDTAYLFDEMHPAREFCVQYGETDYEFLCRLIAEEGIFFYEEHAQKGSRQK
LVFCDRVVCLPEAFPVPFNPQPRGTFTECINRFRYSAQIRPAYVITKDYSFKAPHWQARY
RNDAPGLNGQRNQYEKLDYPGRFKDEQHGKDFVRYQTEGWRNDAETASGSSNSPKLWPGA
RFTLTEHPADDLNRDWQVVASELHGEQPQASPGTHKEGTTLVNEFQAIPADKTWRSSPLP
KPKVDGPQPAVVTGPEGEEIFCDEHGRVRVKFLWDRYHKANEDSSCWIRVSQPWAGAGFG
HLAVPRVGQEVIVDFLNGDPDQPIIVGRTYHHDNRSPGNLPLTRTQTTIRSKTYKGNGFN
ELRFEDMTGQEEVYIHAQKDMNHVINHDRTSLTKRHSVDKVQGNSAVLVDESQVMQVGGT
QNTSIGGDYVLSVGNHFTDGYRKMNLAAFQDDAATLLKQSAFLVGANGIMPGMGNMTTFV
QGSRTEHINLTDTSSVIGAKLINAGEMISISAGTLLSLTSGENSKETCGGVKIIQAVDGI
ELHTGMASLTLRNNGHIEIKGIKVTIEGSDDVTVKTQALNIQSE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtcacaggcaggtcttcggtttactgttgatgtggatggtcagcccactgaaaccttt
gccgtcactcgctttcacctctcgcaatcctacttctctctgtttacgctggaaattaat
acggtcagtgaacggaccaccctgaaagccagtacactactggaacagacggcacaatta
actatctggcagggcagcacaccgttacgctatgtgacaggactgatcgccggatttgaa
cgcggtgaatatgacgggcgaaaaaccagctacagcctgacggttcgccccccgctctgg
cgcagcagcctacggcagaattttcgtcattttcagcagcaggatatccagagcattatt
cagcggctgcttgatgataaccgggtgggagatacagcatacctgttcgatgaaatgcat
cctgcgcgggagttttgcgtgcagtacggcgaaaccgactatgagtttctctgccgactg
attgcagaggaaggcatctttttttatgaggaacatgcccaaaaaggctcccggcaaaag
ctggtattttgtgatcgcgtggtctgcctgccggaggcatttcctgtccccttcaatccg
cagccccgcggcacattcaccgagtgtatcaaccgctttcgttacagcgcacagatccgc
ccggcttatgtcatcaccaaagattactcctttaaagccccccactggcaggcccgttac
cgtaatgatgcacccggtctcaacgggcagcgcaaccagtatgaaaagctggattacccg
ggccgtttcaaggatgaacaacatggaaaggattttgtccgctatcagacagagggatgg
cgcaacgatgctgaaacggcatctgggagcagtaattcgccaaagctgtggccgggagca
cgttttacactgactgagcaccctgccgatgatctgaaccgggactggcaggtagtggca
agtgaactgcatggcgaacaaccgcaggcctcaccgggaacacataaagaaggtaccacg
ctggtaaatgaatttcaggcgatacccgcagataaaacctggcgctcttcaccgctaccc
aaaccgaaagtggatggtccgcagccagcggtagtcaccggaccagagggggaggaaatt
ttttgcgacgaacatggtcgggtaagagttaaatttttgtgggatcgctatcacaaagcg
aatgaagacagttcatgctggatacgggtgtctcagccgtgggctggtgcgggttttggt
catctggctgtcccacgagtgggtcaggaggtgatcgtggacttcctgaacggtgatccg
gatcagccgattatcgtcgggcgaacctatcatcacgataaccgctcgccaggaaacctg
ccactaaccagaacacaaacaacgattcgctcaaaaacatataaagggaacgggtttaat
gaactgcggtttgaagatatgaccgggcaggaagaggtttatattcatgcgcagaaggat
atgaatcatgttatcaaccatgatcgcaccagcctgaccaaacggcattctgtggacaag
gtacagggtaacagtgctgtcctggtggatgaaagccaggtgatgcaggttggtggcact
caaaataccagtattggcggagactatgttttgtcggtaggtaatcattttacggatggc
taccgtaaaatgaatctggcagctttccaggatgatgccgccaccctgttgaaacaatcg
gcatttttagtcggtgctaacggcatcatgcctggtatgggaaacatgaccacttttgta
cagggaagtagaacggaacatattaatctgacagacaccagttcagtaattggtgcaaaa
ctgatcaatgccggagaaatgatttcaatcagtgccggaacattactgagtctgacttct
ggagagaatagcaaggaaacatgtggtggcgtaaaaataatccaggcagttgatggaata
gaattacatacgggaatggcctctttgacattaagaaacaatggtcatatagagatcaaa
ggaataaaagttacgatagaaggcagtgatgatgtgacagtaaaaacacaggctcttaac
attcaaagtgaataa

DBGET integrated database retrieval system