Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2550
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Entry
ECRM13516_2550 CDS
T03011
Symbol
erfK
Name
(GenBank) L,D-transpeptidase ErfK
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoh01002
]
ECRM13516_2550 (erfK)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
ECRM13516_2550 (erfK)
Peptidases and inhibitors [BR:
ecoh01002
]
Cysteine peptidases
Family C82
ECRM13516_2550 (erfK)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECRM13516_2550 (erfK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AHG15205
LinkDB
All DBs
Position
complement(2498988..2499920)
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AA seq
310 aa
AA seq
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MRRVNIFCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG
LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV
QISSGSRQMF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtgtaaatattttttgctcatttgctctgctttttgccagccaaaatagcctg
gcggtaacttatccattacctccagagggtagccgtttagtggggcagtcgcttactgta
actgttcctgatcacaatactcagccgctggagacttttgccgcacaatacgggcaaggg
ttaagtaatatgctggaagcgaatccgggcgctgatgtttttttgccgaagcctggctca
caactcaccattccgcagcaactgattttgcccgccactgttcgtaaagggattgtggtt
aacgtcgctgaaatgcgtctttattactatccgccagacagtaatacagtggaagtcttt
cctattggtatcggccaggctgggcgagaaaccccgcgtaactgggtgactaccgttgaa
cgtaaacaagaagcaccaacctggacgccaacgccgaacacccggcgcgaatatgcgaaa
cgaggggagagtttgcccgcatttgttcctgcggggcccgataaccccatggggctgtac
gcgatttatattggcaggttgtatgccatccacggtaccaatgccaattttggtattggg
ctccgtgtaagtcagggctgtattcgtctgcgtaatgacgatatcaaatatctgtttgat
aatgttcctgtaggcactcgtgtacaaattattgatcagccagtgaaatacacaacggaa
ccggatggttcaaagtggctggaagttcatgagccgctgtcgcgcaatcgtgcagaatat
gagtctgaccgaaaagtgccattgccggtaaccccatctttgcgggcgtttatcaacggg
caagaagttgatgtaaatcgcgcaaatgctgcgttgcaacgtcgatcgggaatgcctgtg
caaattagttctggttcaagacagatgttttaa
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