Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2598
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Entry
ECRM13516_2598 CDS
T03011
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00550
Peptidoglycan biosynthesis
ecoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ECRM13516_2598 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoh01002
]
ECRM13516_2598 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
ECRM13516_2598 (dacD)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ECRM13516_2598 (dacD)
Peptidases and inhibitors [BR:
ecoh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ECRM13516_2598 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ECRM13516_2598 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AHG15253
LinkDB
All DBs
Position
complement(2536868..2538034)
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AA seq
388 aa
AA seq
DB search
MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD
LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG
FNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW
YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEIELYDRDKQV
AHWPLVTLESVGEGSMFSRLSDYFHHKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgccgtcttattattgctgcttctttgttcgtttttaacttatcgtctggtttt
gcggcggaaaacattcctttttcacctcagcctccagagattcatgccgggtcctgggta
ctgatggattacaccaccggacagatcctcaccgcgggtaatgagcatcaacagcgcaat
cccgccagcctgacaaagctgatgacgggttatgtcgtggatcgcgctatcgatagtcat
cgcattacgccagacgatattgtcaccgtggggcgcgatgcgtgggcgaaagataatccg
gtgtttgtcggttcttcactgatgtttttgaaagagggcgatcgcgtatcggtacgtgat
ttaagccgtggtttaattgtggattccggaaatgacgcttgtgttgctctggctgactat
attgccggtgggcaacggcagtttgttgaaatgatgaacaactatgccgagaagctgcat
ctcaaggatacgcattttgaaacagtgcatggtctggatgcacctggccagcatagctcg
gcttatgatttagccgtgctttctcgcgctatcatccacggcgagcccgagttttatcat
atgtacagtgagaaaagtctcacctggaacggtatcacccagcaaaaccgtaacgggtta
ttgtgggataagaccatgaatgttgacggcctgaaaacgggccatacttctggtgccggg
tttaatcttattgcttcggctgtagacgggcagcgtcgcctcattgcagtggtaatgggt
gctgacagcgcaaaaggtcgtgaggaagaggcaaaaaaattactgcgttgggggcaacaa
aactttactacggtgcaaattttgcaccgtaggaaaaaggtcggtacggaacgcatctgg
tatggtgataaagaaaatatcgccctgggaacggaacaagagttctggatggtgctaccg
aaagccgaaattccacatatcaaagccaaatatacccttaatggtaaagagctcaccgcg
ccaattagcgcccatcagcgggtaggggaaattgaactttacgaccgtgataaacaggtg
gcgcactggccgctggttaccctggaatctgtcggggaaggcagcatgttttctcgcctg
agtgattatttccaccataaggcctga
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