Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2648
Help
Entry
ECRM13516_2648 CDS
T03011
Symbol
wcaC
Name
(GenBank) Colanic acid biosynthesis glycosyl transferase WcaC
KO
K13684
putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
ECRM13516_2648 (wcaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecoh01003
]
ECRM13516_2648 (wcaC)
Glycosyltransferases [BR:
ecoh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ECRM13516_2648 (wcaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-ProteinID:
AHG15304
LinkDB
All DBs
Position
complement(2590712..2591929)
Genome browser
AA seq
405 aa
AA seq
DB search
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
RMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLNSVVRFCEKV
KNHKPDATLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDVATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQ
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgcaatttaatgtgcgactggcggaaggcggggcagcaggtgtggcgtta
gatctccaccagcgtgcgctgcaacaggggctggcgtcacattttgtctatggctacggc
aaaggcggcaaagagagcgtcagccatcagaactatccgcaggtcatcaaacatacgccg
cggatgaccgcgatggcgaatattgccctgtttcgtctgtttaatcgcgatctgttcggc
aatttcaatgagttatatcgcaccattactcgcacaccgggtccggtggtcctgcatttt
catgtgctgcacagctactggttgaatcttaacagcgtggtgcgcttttgcgaaaaggtg
aaaaaccataaaccggacgccactctggtctggacgctgcacgatcactggagcgttacc
ggacgctgcgcctttaccgacggttgcgaaggctggaaaacgggctgccagaaatgcccg
accttaaataactatccgccggtgaagattgatcgggcgcaccagctggtggcgggcaaa
cgccagttattccgcgagatgctggcactgggctgtcagtttatttcccccagccagcat
gtggctgacgctttcaatagtctgtacggtccagggcgttgccggattatcaataatggt
attgatgtggcaacagaagcgattctggcggacttgcctccggtacgcgaaacccagggc
aagccgaaaatcgcggtggtggcgcatgacctgcgttacgacggcaagactaaccagcaa
ctggtgcgtgagatgatggcgctgggcgataaaatcgaactgcatacctttggtaagttc
tcgccgttcaccgctggcaacgtggttaatcacggctttgaaactgacaagcgcaagttg
atgagcgcgctcaatcagatggatgcgctggtgttcagttctcgcgtcgataactacccg
ctgattttgtgtgaggcgctatcgattggcgtgccggtgattgccacccatagcgacgcg
gcgcgggaagtgctgcaaaaatccggcggtaaaaccgtcagcgaagaagacgtgctgcaa
ctggtgcagttaagcaaaccggaaatcgcgcaggcgatatttggtaccacgctggctgag
ttcagccaacgcagccgcgccgcctacagtggacaacagatgctggaggagtatgtcaac
ttctatcagaatctgtag
DBGET
integrated database retrieval system
