Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2719
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Entry
ECRM13516_2719 CDS
T03011
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_2719 (gatR)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECRM13516_2719 (gatR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
CoA_trans
GntR
Motif
Other DBs
NCBI-ProteinID:
AHG15375
LinkDB
All DBs
Position
complement(2664694..2665410)
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AA seq
238 aa
AA seq
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MLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQL
ASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENK
DITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGA
MVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgccgat
ttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaaata
atgtctggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcagctc
gccagcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaagggatg
accgttattctcgacagcggaagtacgacaatgcttatcgccgaaggattaatgaccgcc
aaaaatatcacggtgattaccaacagtctcccggcagcgtttgccctttccgaaaataaa
gacattactctggtcgtctgtggtggcacggtccgccataaaacgcgctcgatgcatggt
tccattgccgagcgttcattacaggatattaatgccgatttaatgtttgtcggtgctgat
ggtattgatgcggttaatggtattacgacctttaatgaaggttattctattagcggtgcg
atggtcacagccgctaataaagtgattgccgttctcgattcatcgaaatttaaccgtcgc
ggttttaatcaggtactaccaatcgaaaaaattgacattattattaccgatgatgctgtg
tcagaggtggataaactggcattgcagaagacgcgggtaaaattaattacggtgtag
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