Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2970
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Entry
ECRM13516_2970 CDS
T03011
Symbol
elaC
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoh03016
]
ECRM13516_2970 (elaC)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
ECRM13516_2970 (elaC)
Transfer RNA biogenesis [BR:
ecoh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
ECRM13516_2970 (elaC)
Prokaryotic type
ECRM13516_2970 (elaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AHG15623
LinkDB
All DBs
Position
2925855..2926790
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AA seq
311 aa
AA seq
DB search
MKRDELMELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNP
GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDY
PLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPL
FQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEAT
LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPAT
ELANDFTVFNV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtgatgaactcatggaattaatttttttaggtacttcggccggtgtgccaacc
cgcacgcgcaatgtcacggcaatattgcttaacctgcaacatccgacccagagcggactt
tggttgtttgactgcggtgaaggcacccagcatcagctactgcataccgcctttaaccct
ggaaaactggacaagatttttatcagtcaccttcatggcgatcatctttttggtttaccc
ggcttgctgtgcagtcgttctatgtcaggcattatccaacccttaacgatttatggtccg
caaggtatccgtgaatttgtggagaccgcgctgcggattagcggctcatggaccgattat
ccgctggaaattgtcgaaattggcgctggcgaaattctcgacgatggcctgcgcaaagtg
accgcttatccaatggaacacccactggaatgttatggctatcgtattgaagaacatgat
aaaccgggtgcattaaatgcccaggcattaaaagctgctggcgtgccgcctggcccactg
tttcaggaattaaaagcgggcaaaacaatcacgctggaagatggaaggcagattaacggc
gcagattacttagctgctccagtgccaggtaaagcgctcgctattttcggcgataccggc
ccctgcgatgccgcacttgacctggctaaaggtgtcgatgtcatggtgcacgaagcgacg
ctggatataaccatggaagccaaagccaatagtcgcggtcatagctctacacgccaggct
gcgacactggcccgtgaggctggagtcggtaagctaatcattacccacgtcagctcgcgc
tatgatgacaaaggttgtcagcacctgttacgtgaatgcaggtcaattttcccggcgact
gaactagcgaatgatttcaccgtgtttaacgtttaa
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