Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3230
Help
Entry
ECRM13516_3230 CDS
T03011
Symbol
yphF
Name
(GenBank) putative sugar ABC transport system, periplasmic binding protein YphF precursor
KO
K23545
sugar transport system substrate-binding protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECRM13516_3230 (yphF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_3230 (yphF)
Transporters [BR:
ecoh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Sugar transporter
ECRM13516_3230 (yphF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
BD-FAE
Glyco_hydro_59
Motif
Other DBs
NCBI-ProteinID:
AHG15876
LinkDB
All DBs
Position
complement(3202400..3203383)
Genome browser
AA seq
327 aa
AA seq
DB search
MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSV
QVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNT
CINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRK
GFEEVLKARVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVR
NQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEK
VIQVPIDLYTKTEDGKQWLATHVDGLP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaaaatgagaacaacccgtaatctattattaatggctacgctattaggtagc
gcactatttgccagagctgcggataaagaaatgaccattggcgcaatataccttgatact
cagggatattacgctggagtgcgtcagggcgttcaggatgcggcaaaagattcttcagta
caggtacagttaattgaaactaacgcccagggtgatatttcgaaagaaagtacctttgtt
gataccctcgtggcgcgtaatgtcgatgctattattttatcggcagtgtctgaaaatggc
agtagccgtaccgttcgtcgcgccagtgaagcgggtattccggtgatttgctacaacacc
tgtattaatcaaaagggtgtcgataaatatgtctcggcatatctggtgggtgacccgctg
gaatttggtaaaaaactgggtaacgctgccgccgattattttattgccaacaaaattgac
cagccgaaaattgccgtcatcaattgcgaagcctttgaagtttgtgtgcaacgacgtaaa
gggtttgaagaagtattaaaagcccgcgttcccggcgcgcaaattgtcgctaatcaggaa
gggactgttttagataaagcgatttccgtcggtgaaaaactgattatctccacgccggat
ctcaacgccattatgggggaatcgggcggtgcgacactcggcgcggtaaaagcggtacgt
aatcaaaatcaggccggaaaaattgctgttttcggttcggatatgacaaccgaaattgct
caggagctggaaaacaatcaggtgctgaaagcggtagtggatatttccggtaagaaaatg
ggcaatgctgttttcgcgcaaacattgaaggttatcaataaacaagccgacggtgaaaaa
gtgattcaggtgccaatcgatctctataccaaaacggaagacggtaaacagtggctggca
acgcacgttgatggtctgccctaa
DBGET
integrated database retrieval system
