Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3241
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Entry
ECRM13516_3241 CDS
T03011
Symbol
yfhD
Name
(GenBank) Transglycosylase, Slt family
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
ECRM13516_3241 (yfhD)
Enzymes [BR:
ecoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ECRM13516_3241 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ECRM13516_3241 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AHG15887
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Position
3219835..3221391
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AA seq
518 aa
AA seq
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MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEIN
GKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQ
PGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVD
DKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNT
LSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAE
EIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYL
QDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQ
KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTE
LGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKHN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattaaagattaattatctgttcatcggcattctggcactgctgctcgcggtc
gctctctggccatccattccctggtttggtaaagccgacaaccgtatcgccgccattcaa
gcgcggggagagttgcgtgtgagcaccattcatactcccctgacttataacgaaatcaac
gggaaaccttttggcctggattacgaactggcgaaacagtttgccgattacctcggtgta
aaactgaaagtgaccgtgcggcagaatatcagccagctgtttgacgacctcgataatggt
aacgccgacctgctggcggcaggacttgtctataacagtgagcgggtaaaaaattatcag
cctggccctacctattattccgtgtcacaacaactggtttataaagtgggtcagtatcgc
ccacgtacgctgggcaacctgacggcggagcaacttaccgttgcaccgggtcatgtggtg
gttaacgatctccagaccctgaaagaaacaaaattcccggaattaagctggaaggtagac
gacaaaaaaggctctgcggaattaatggaagatgtcatcgaaggaaaactcgattacacc
attgctgattctgtcgccatcagcctgtttcagcgcgttcacccggagctcgccgtagcg
ctcgatatcaccgatgaacaaccggtgacctggtttagcccgttagatggcgataatacc
ctttccgccgccctgctcgacttcttcaacgaaatgaatgaagacggtacgctggcacgc
attgaagagaaatacctggggcatggcgatgattttgattacgtcgatacgcgcacattt
ttacgcgccgtcgatgcggtactgccgcagttaaagcccctgtttgagaaatacgccgaa
gaaattgactggcgtttgctggccgctattgcttatcaggaatcgcactgggatgcacag
gccacttcaccgacgggtgtgcgcggcatgatgatgttaaccaaaaataccgcgcaaagc
ctcggcattacggatcgtaccgatgccgaacagagcatcagcggtggcgtgcgttatttg
caggatatgatgagtaaagtgccggaaagtgtgccggagaacgaacggatctggtttgcc
ctcgctgcgtacaatatgggctatgcgcatatgctggatgcccgcgccctgacggcaaaa
accaaagggaatcctgacagttgggctgacgtaaaacagcgtctgcctttacttagccag
aaaccctattacagcaagctgacttacggctacgctcgtgggcatgaagcctacgcctat
gtcgaaaatattcgtaagtatcagattagcctggtgggttatctgcaagagaaagagaag
caggctacagaagcggcgatgcaactggcgcaggattatccggcggtatcgcctacggag
ttgggcaaagagaaatttccttttctctcgtttctttcccagtcgtcatcaaactatttg
acccattctccctctctgctgttttccaggaaagggagtgaagagaaacataattaa
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