Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3292
Help
Entry
ECRM13516_3292 CDS
T03011
Symbol
ffh
Name
(GenBank) Signal recognition particle, subunit Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02024
Quorum sensing
ecoh03060
Protein export
ecoh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ECRM13516_3292 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ECRM13516_3292 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECRM13516_3292 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecoh02044
]
ECRM13516_3292 (ffh)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ECRM13516_3292 (ffh)
Secretion system [BR:
ecoh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ECRM13516_3292 (ffh)
Eukaryotic Sec-SRP protein
ECRM13516_3292 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_16
AAA_24
Helicase_RecD
AAA_33
AIP3
APS_kinase
T2SSE
GlnD_UR_UTase
AAA_14
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AHG15934
LinkDB
All DBs
Position
complement(3270110..3271471)
Genome browser
AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgcctcactgaagacaacgtaaaagatacgctgcgcgaagtgcgcatggcgctgctggag
gcggacgtcgctctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaataagagcctgacgccggggcaggagttcgtcaaaatcgtccgtaac
gaactggttgcggcgatgggcgaagagaaccagaccctgaacctggctgcgcaaccgcca
gcggtcgtgctgatggcgggcctgcaaggtgccggtaaaacaaccagcgttggtaaactc
ggtaagttcctgcgcgagaagcacaagaagaaagtgttggtggtttctgccgacgtctat
cgcccggcggcaatcaaacagcttgagacgctggctgagcaggtgggcgttgatttcttc
ccttctgatgttggtcagaagccggtagatatcgttaacgcggcgctgaaagaagccaaa
ctgaaattctacgacgtgctgctggtggataccgctggtcgtctgcacgttgacgaagcg
atgatggacgagatcaaacaagtccatgcgtcgattaacccggttgaaaccctgtttgtg
gttgacgccatgaccggtcaggatgcggccaatacggcaaaagcattcaatgaagcgtta
ccgcttaccggcgtagtgttgaccaaagtggacggcgatgcccgcggcggtgcggcgctc
tctattcgtcacatcactggcaaaccgatcaagttcctcggtgttggcgagaaaactgag
gcgctggagccgttccatccggaccgcattgcgtcgcgtattctcggcatgggcgacgta
ctgtcgctgatcgaagatatcgaaagcaaagttgaccgcgcgcaggcagagaaattagcc
agcaagctgaaaaaaggtgacggcttcgatctcaacgactttcttgagcaactgcgccag
atgaaaaatatgggcggcatggccagcttgatgggcaaactgccgggcatggggcagatc
ccggataacgtcaagtcgcagatggacgataaagtgctggtgcgtatggaagccatcatc
aactcaatgacgatgaaagagcgcgctaagccagaaatcatcaaaggttcgcgtaaacgc
cgtattgctgccggttgcggtatgcaggtgcaggacgttaaccgtcttctgaaacagttc
gacgacatgcagcgcatgatgaagaaaatgaagaagggcggaatggcgaagatgatgaga
agcatgaaagggatgatgccaccaggatttcctggtcgctaa
DBGET
integrated database retrieval system
