Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3377
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Entry
ECRM13516_3377 CDS
T03011
Name
(GenBank) Transcriptional regulator, GntR family domain / Aspartate aminotransferase
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_3377
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECRM13516_3377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
MarR_2
HTH_Crp_2
HTH_IclR
DUF977
HTH_50
CUT
Motif
Other DBs
NCBI-ProteinID:
AHG16017
LinkDB
All DBs
Position
complement(3346001..3347335)
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AA seq
444 aa
AA seq
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MPRYQDIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRG
QAGTFVSEQIHPQQSAVDVVAFAGESQQPLPFQMGLPALDLFPRELWVRVMGRRLRTQTR
FDLALGDVCGEAALREAIVDYLRVSRGIDCQPEQVFITHGYAASMALILHALAQPGDGMW
MEDPGLPLIRPIVTRHGVEILPVPVDDNGLDVTSGIQNYPDARFALITPAHQSPLGVALS
LARRYQILEWAERSQAWIIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAGTFSKALFPAL
RCAWLVVPVEQISQFRQQASLEPCAVPVLWQNTLADFIREGHFWRHLKKMRQHYAQRRQW
IEQALTQQGFQVVPQKGGIQMVIKLAGNDVTFVHKANAAGLAVQALSDWRIRSSEDGGLL
LSFTNIVSESMARQVAQQLRSALN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccacgttatcaggatatcgcccgtcagttaaaaacggctatcgagcaaggagagctg
aaacctggcgcaaggctaccctcgagccgtacctggtcgcaggagctgggtgtctctcga
tccactgtcgaaaatgcttatgctgagctggtggcgcagggatggctggtcaggcgggga
caggcgggtacctttgtcagtgagcagatacatccgcaacagtctgctgtggatgtcgtg
gcttttgctggtgaaagtcagcagccgctgccttttcagatggggctacctgcacttgat
ctttttccgcgtgaattgtgggtgcgggtgatgggccgccgtctgcgtacccagacgcgt
tttgatttggcattaggcgatgtctgcggcgaggcggccttgcgcgaggctattgttgat
tatttacgcgtttcacgtgggattgattgtcagccagagcaggtctttatcactcacggt
tatgcggcctcaatggctttaattctgcacgctctggcgcaaccgggagacgggatgtgg
atggaagatcccggcttaccgctgattcgcccgattgtcactcgccacggtgtggaaatt
ttacctgtgccggttgatgacaacggactggatgtcacaagcggaatacaaaattatcct
gatgcgcgttttgccctgattactccggcacaccaaagcccgctgggtgtggcactctct
ttagcgcgtaggtatcagatactggaatgggcagagcgtagtcaggcatggattattgaa
gatgattacgacagtgagtttcgctatcacggtaagccgttaccggcactaaaaagtctc
gacgcgccgcagcgggtgatttatgccggaacattcagcaaagcgctatttcctgcattg
cgctgtgcgtggctggtggtgccggtggagcagatttcgcaattccggcagcaggcgtca
ctggaaccatgtgctgtacccgtactgtggcagaacacactggcagatttcatccgtgag
gggcatttctggcggcatctgaagaaaatgcgccagcattatgcccagcgacggcagtgg
attgagcaggcacttacgcagcagggatttcaggttgtgccgcaaaaaggcggtatccag
atggtgatcaaactagcaggtaatgacgtgacattcgtgcataaagccaatgctgctggt
cttgccgtacaggcacttagcgactggcgtatccgctcaagcgaggacggaggattattg
ctctcgtttacgaatatcgttagcgaaagtatggcgcgacaggtagcacagcaattgcgc
agtgctttaaattaa
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