KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3382
Entry
ECRM13516_3382    CDS       T03011                                 
Symbol
nrdF
Name
(GenBank) Ribonucleotide reductase of class Ib (aerobic), beta subunit
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00230  Purine metabolism
ecoh00240  Pyrimidine metabolism
ecoh01100  Metabolic pathways
ecoh01232  Nucleotide metabolism
Module
ecoh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ecoh_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    ECRM13516_3382 (nrdF)
   00240 Pyrimidine metabolism
    ECRM13516_3382 (nrdF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecoh03400]
    ECRM13516_3382 (nrdF)
Enzymes [BR:ecoh01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     ECRM13516_3382 (nrdF)
DNA repair and recombination proteins [BR:ecoh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    ECRM13516_3382 (nrdF)
SSDB
Motif
Pfam: Ribonuc_red_sm LMSTEN
Other DBs
NCBI-ProteinID: AHG16022
LinkDB
Position
3350842..3351801
AA seq 319 aa
MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSVVEQQLTMRVF
TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA
AYAWSEENAPLQRKAQIIQQHYRSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN
TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL
YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILTALSPNADENHDFFSGS
GSSYVMGKAVETEDEDWNF
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaaactctcacgtatcagcgccatcaactggaacaagatatctgacgataaagatctg
gaggtgtggaatcgcctgaccagcaatttctggctaccagaaaaagtgccactatcgaac
gatattcctgcatggcagacactaagtgtcgtagaacaacaactgacgatgcgcgttttt
actggcctgacgctgctcgacacgctgcaaaatgttatcggcgcgccttcgctgatgccc
gatgcgctcacgccccatgaagaggcggtattatcgaatatcagctttatggaagcggtt
catgcccgttcttacagttcgattttctcgacgttgtgccagaccaaagatgtcgatgcc
gcctacgcctggagtgaagaaaacgcaccgttgcagcgaaaagctcagattattcagcaa
cattatcgcagtgatgaaccgctgaaaaagaaaatcgccagtgtgtttcttgaatctttt
ttgttctattccggtttctggctgccgatgtatttttccagccgcggaaagctaaccaat
accgcagacctgatccgtctgattatccgggatgaagcagtccacggttactacatcggc
tataaatatcagaaaaacctggaaaagatctcccaggcacgacgtgaagaattgaagagt
ttcgccttcgatttgttgctggaactctatgacaacgagttgcaatacaccgatgagctg
tacgccgaaaccccgtgggctgacgatgtgaaagcgtttctctgttacaacgccaataag
gcgttgatgaatctgggctacgaaccgctatttcccgcagaaatggcggaagtgaatccg
gcaatcctcaccgcgctttcgccgaatgccgatgaaaatcacgatttcttttccggttca
ggctcttcatatgtgatgggaaaagcggtcgaaacagaagatgaagactggaatttctga

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