KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3580
Entry
ECRM13516_3580    CDS       T03011                                 
Name
(GenBank) Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
  KO
K22504  type III secretion system outer membrane ring protein
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_3580
Secretion system [BR:ecoh02044]
 Type III secretion system
  Type III secretion core apparatus
   ECRM13516_3580
SSDB
Motif
Pfam: T3S_SPI-1_N0 Secretin Secretin_N KH_SLS1_1
Other DBs
NCBI-ProteinID: AHG16212
LinkDB
Position
complement(3543056..3544759)
AA seq 567 aa
MKIKLRITIILISVLCIFNGLLTPGAYAAAANGYVANKENLRSFFETVSSYAGKPTIVSK
LAMKKQISGNFDLTEPYALIERLSAQMGLIWYDDGKAIYIYDSSEMRNALINLGKVSTNE
FNNFLKKSGLYNSRYEIKGGGNGTFYVSGPPVYVDLVVNAAKLMEQNSDGIEIGRNKVGI
IHLVNTFVNDRTYELRGEKIVIPGMAKVLSTLLNNNIKQSTGVNVLSEISSRQQLKNVSR
MPPFPGAEEDDDLQVEKIISTAGAPETDDIQIIAYPDTNSLLVKGTVSQVDFIEKLVATL
DIPKRHIELSLWIIDIDKTDLEQLGADWSGTIKIGSSLSASFNNSGSISTLDGTQFIATI
QALAQKRRAAVVARPVVLTQENIPAIFDNNRTFYTKLVGERTAELDEVTYGTMISVLPRF
AARNQIELLLNIEDGNEINSDKTNVDDLPQVGRTLISTIARVPQGKSLLIGGYTRDTNTY
ESRKIPILGSIPFIGKLFGYEGTNANNIVRVFLIEPREIDERMMNNANEAAVDARAITQQ
MAKNKEINDELLQKWIKTYLNREVVGG
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaaaataaaattacgcattactattatattaatttcagtcttatgcatttttaatgga
ttattgactcctggtgcatatgccgcagcagcgaatggatacgtagcaaataaagaaaat
ctacgtagtttttttgaaacggtttcatcatatgcgggtaagcctacaatagttagtaag
cttgccatgaagaaacagatcagtggaaattttgatttaacagaaccctatgccttgatt
gaacgcctgtcggcacagatggggcttatttggtatgatgatggcaaagctatttatatc
tatgactcatcagagatgcgtaatgcattgattaatctgggaaaggtatcgacgaatgag
tttaataatttcttaaaaaaatcgggtctgtataactctcgttatgaaattaaagggggc
ggcaatggtactttctatgtatcggggccaccggtttatgttgacctggtcgttaatgct
gcgaaattaatggagcaaaacagcgatggcattgagatcggtcgaaataaagtaggaata
attcatctggtcaacacattcgttaatgaccggacttatgagttacgtggcgaaaagata
gttattcctggcatggcaaaagtactatcgacgttgttaaataataacattaagcaaagc
acaggggtgaacgtactttctgaaatttcaagtcgtcaacaactaaaaaacgtatcacgt
atgcctccttttcctggtgctgaagaagatgatgacctacaagtagagaaaataatatcg
acagcaggagcgccagagactgacgatatacaaattattgcatatcctgataccaacagt
ttacttgttaaaggaacagtatctcaggttgattttatcgagaagttagtagctacgctt
gatattccaaagcgacacattgaattatctttatggataatagatattgataagactgat
ctagaacagctaggtgctgactggtcgggcacgataaaaattggatccagcttaagtgca
tcatttaataattcaggttcaattagtacccttgatgggacacagtttattgcaacaata
caggcacttgcacaaaaaagaagagccgccgttgttgctcgtcccgtcgttttaacacag
gagaatattcctgctatatttgataataaccgtacattctatactaaattagtcggcgag
cgtactgcagaattggatgaagtaacctatggtacgatgattagcgtgctaccacgattt
gctgcgcgaaatcaaattgaattactcttgaatattgaagatggcaatgaaataaattct
gacaagaccaatgttgatgatctgcctcaggttggtagaacgcttataagtactattgca
cgtgtgccccaagggaaaagtcttttgattgggggatatacacgcgatacgaatacctat
gaaagtcgcaagatcccaatattaggcagcattccatttattggtaaattatttggttat
gaaggaacaaatgcgaataacatcgttcgtgtctttcttattgagccaagagagatcgat
gagcgcatgatgaataatgcgaatgaggctgcggttgatgccagagcgattacacagcaa
atggcaaaaaataaagaaattaacgatgaattactgcagaaatggataaaaacttacctg
aatcgtgaagtcgtcggaggatag

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