Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3618
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Entry
ECRM13516_3618 CDS
T03011
Symbol
ygfZ
Name
(GenBank) Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress
KO
K06980
tRNA-modifying protein YgfZ
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoh03016
]
ECRM13516_3618 (ygfZ)
Transfer RNA biogenesis [BR:
ecoh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
ECRM13516_3618 (ygfZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
DUF6237
Sortase
Motif
Other DBs
NCBI-ProteinID:
AHG16249
LinkDB
All DBs
Position
3590270..3591250
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AA seq
326 aa
AA seq
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MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLA
AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTFAPDDERVLLGV
AGFQARAALAKLFSELPSREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE
AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWLLTGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM
EPDSIFRVRDDANTLHIEPLPYSLEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaccttttcctccacgtcagcctacggcttctgcccgtttaccgctgacg
ctgatgacgcttgatgactgggcgcttgccaccattactggcgcggacagcgaaaaatat
atgcagggccaggtgacagcagatgtcagccagatgacagaaaatcagcacctgctcgcc
gcccattgcgacgccaaaggtaaaatgtggagcaatttacgtctgttccgcgacggcgat
ggctttgcgtggattgaacggcgcagcgtgcgtgaaccgcagctgactgaactgaaaaaa
tatgcggtgttctctaaagtgaccttcgcgccagacgacgagcgtgtgctgcttggtgtt
gccggttttcaggcgcgcgccgcgctggccaagctctttagtgaactaccttcgagagaa
aaacaggtagttaaagaaggcgcgaccactttgctatggtttgaacacccggcagaacgt
ttcctgatcgtaaccgatgaagctactgccaatatgctgaccgataaactgcgcggtgaa
gcggaactgaacaatagccaacagtggctggcattaaacattgaagcgggtttcccggtg
attgatgccgcgaacagcgggcagtttatcccacaggcgaccaatctccaggcgctgggc
ggtatcagctttaagaaaggctgttataccggacaagagatggtggcgcgagcaaaattc
cgtggtgccaacaaacgcgcgctctggttgctgacaggtagtgccagccgactgccggaa
gctggtgaagatttagagctgaaaatgggcgagaactggcgtcgcaccggtacggtgctg
gctgcggtaaaactggaagatggtcaggtcgtggtacaggtcgtcatgaataacgatatg
gaaccggacagcatcttccgcgtgcgtgacgatgcgaatacattgcatatcgagccgctg
ccgtattcgctcgaagagtaa
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