Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3667
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Entry
ECRM13516_3667 CDS
T03011
Symbol
speA
Name
(GenBank) Biosynthetic arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00330
Arginine and proline metabolism
ecoh01100
Metabolic pathways
ecoh01110
Biosynthesis of secondary metabolites
Module
ecoh_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ECRM13516_3667 (speA)
Enzymes [BR:
ecoh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
ECRM13516_3667 (speA)
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Ortholog
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AHG16297
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Position
complement(3639493..3641391)
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AA seq
632 aa
AA seq
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MSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRL
PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG
LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV
LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL
QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC
SVNYGLNEYANNIIWAIGDACEENSLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTV
PTAPAEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERA
WAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFP
VLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQFRD
QVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaggaagccagcaagatgctgcgtacttacaatattgcctggtggggcaat
aactactatgacgttaacgagctgggccacatcagcgtgtgcccggacccggacgtcccg
gaagctcgcgtcgatctcgcgcagttagtgaaaactcgtgaagcacagggtcagcgtctg
cctgcactgttctgtttcccacagatcctgcagcaccgtttgcgttccattaacgccgcg
ttcaaacgtgcgcgggaatcctacggctataacggcgattacttccttgtttatccgatc
aaagttaaccagcaccgtcgcgtgattgagtccctgattcattcgggcgaaccgctgggt
ctggaagccggttccaaagccgagttgatggcagtgctggcacatgctggcatgacccgt
agcgtcatcgtttgcaacggttataaagaccgcgaatatatccgcctggcattaattggc
gagaagatggggcacaaggtctatctggtcattgagaagatgtcagaaatcgccattgtg
ctggatgaagcagaacgtctgaatgtcgttcctcgtctgggcgtgcgtgcacgtctggct
tcgcagggctcgggtaaatggcagtcctccggcggggaaaaatcgaagttcggcctggct
gcgactcaggtactgcaactggttgaaaccctgcgtgaagccgggcgtctcgacagcctg
caactactgcacttccacctcggttcgcagatggcgaatattcgcgatatcgccacaggc
gttcgtgaatcggcgcgtttctatgtggaactgcacaagctgggcgtcaatattcagtgc
ttcgacgtcggcggcggtctgggcgtggattatgaaggtactcgttcgcagtccgactgt
tcggtaaactacggcctcaatgaatatgccaacaacatcatctgggcgattggtgatgcg
tgtgaagaaaacagtctgccgcatccgacggtaatcactgaatcgggtcgtgcagtgact
gcgcatcacaccgtgctggtgtctaatatcatcggcgtggaacgtaacgaatacacggtg
ccgaccgcgcctgcagaagatgcgccgcgcgcgctgcaaagcatgtgggaaacctggcag
gagatgcacgaaccgggaactcgccgttctctgcgtgaatggttacacgacagccagatg
gatctgcacgacattcatatcggctactcttccggcacctttagcctgcaagaacgtgca
tgggctgagcagctttatttgagcatgtgccatgaagtgcaaaagcagctggatccgcaa
aaccgtgctcatcgtccgattatcgacgagctgcaggaacgtatggcggacaaaatgtac
gtcaacttctcgctgttccagtcgatgccggatgcgtgggggatcgaccagttgttcccg
gttctgccgctggaagggctggatcaagtgccggaacgccgcgctgtgctgctggatatt
acctgtgactctgacggtgctatcgaccactatatcgatggtgatggtattgccacgaca
atgcctatgccggagtacgatccagagaatccgccgatgctcggtttctttatggtcggc
gcatatcaggagatcctcggcaacatgcacaacctgttcggtgataccgaagcggttgac
gtgttcgtcttccctgacggtagtgtagaagtggaactgtctgacgaaggcgataccgtg
gcggacatgctgcaatatgtacagctcgatccgaaaacgctgttaactcagttccgtgat
caagtgaagaaaaccgatcttgatgctgaactgcaacaacagttccttgaagagttcgag
gcaggtttgtacggttatacctatcttgaagatgaataa
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