Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3896
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Entry
ECRM13516_3896 CDS
T03011
Symbol
agaR
Name
(GenBank) Transcriptional repressor of aga operon
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_3896 (agaR)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECRM13516_3896 (agaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_5
PK_C
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
AHG16523
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Position
complement(3858631..3859440)
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AA seq
269 aa
AA seq
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MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI
AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE
IARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF
DMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI
DMIIVDEGIPADSLEGLRKAGVEVILVGE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgacgcttcaggtgagaagcgagtgacaggcaccagcgagcgacgagaa
cagatcattcagcgtctgcgacagcaagggagtgtgcaggttaacgatctgtcggcattg
tatggcgtatctactgtgacgatccgcaacgatctggcgtttctggaaaagcaggggatc
gctgtgcgtgcctatggtggcgcgttgatctgcgatagcacaacgccgtcagtcgagcca
tcagtggaagataaaagcgcgctgaacaccgcaatgaaacgcagcgttgcgaaagctgcc
gttgagttgattcagccaggtcatcgggtgatcctcgattctgggaccaccacttttgag
attgctcgtctgatgcgcaagcacactgacgtaattgcgatgaccaacggtatgaacgtg
gctaatgcgttgctggaagcggaaggcgttgagctgctgatgaccggcgggcatttgcgc
cgtcagtcgcaatctttttacggcgatcaggctgagcaatcgctgcaaaattaccacttc
gatatgctgtttcttggtgtagatgcgatcgatctggagcgcggcgtcagcacacataat
gaagatgaagcccgtttaaaccgccggatgtgcgaagttgcggaacggatcatcgtggtc
accgattccagtaaattcaatcgttccagtttacataagatcattgatactcaacgtatc
gacatgatcattgttgatgaaggcattcctgcggatagcctggaaggactgcgaaaggct
ggggttgaagtgattctggtcggggagtga
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