Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3956
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Entry
ECRM13516_3956 CDS
T03011
Symbol
yrbD
Name
(GenBank) putative ABC transporter, periplasmic component YrbD
KO
K02067
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECRM13516_3956 (yrbD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_3956 (yrbD)
Transporters [BR:
ecoh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
ECRM13516_3956 (yrbD)
Phospholipid transporter
ECRM13516_3956 (yrbD)
Mce system transporter
ECRM13516_3956 (yrbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlaD
Motif
Other DBs
NCBI-ProteinID:
AHG16581
LinkDB
All DBs
Position
complement(3917573..3918124)
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AA seq
183 aa
AA seq
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MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI
GGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED
PELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVG
TTK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgaaaaaaaatgaaatttgggtgggtatctttttattagcagcactgctggcg
gcgctgtttgtttgcctgaaggcggcgaacgtgacgtcaatacgtactgaaccgacctac
acgctttatgcgacgttcgataacattggcggcctgaaagcgcgctctccggtcagcatt
ggtggtgttgttgtgggccgggtggcggatattacgctggacccgaaaacctatctgcca
cgtgtaacgctggaaattgaacaacgttataaccacattccagataccagttcgctgagc
attcgtacttccggcctgctgggagaacaatatctggcattaaacgtcggttttgaagac
ccggaactggggactgctatcctgaaggatggcgatacaattcaggacaccaagtctgcg
atggtgctggaagatctcattggtcagttcctttacggtagtaaaggcgatgacaataag
aatagtggcgatgcgccagctgctgcgccaggtaataatgaaaccactgaacctgtgggt
acaacgaaataa
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