Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3961
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Entry
ECRM13516_3961 CDS
T03011
Symbol
yrbI
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00541
Biosynthesis of various nucleotide sugars
ecoh01100
Metabolic pathways
ecoh01250
Biosynthesis of nucleotide sugars
Module
ecoh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ECRM13516_3961 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
ECRM13516_3961 (yrbI)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
ECRM13516_3961 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
Lipid A
ECRM13516_3961 (yrbI)
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GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
S6PP
HAD_2
Motif
Other DBs
NCBI-ProteinID:
AHG16586
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Position
3921936..3922502
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttata
gcaaaagcagagaacattcgtctgctgatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattagggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatctgctggaaaaattggcgattgccccggaaaatgtg
gcttatgttggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtgacgcgcattgct
ggcggtcgtggcgcagtgcgcgaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga
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