Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4018
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Entry
ECRM13516_4018 CDS
T03011
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_4018 (fis)
03036 Chromosome and associated proteins [BR:
ecoh03036
]
ECRM13516_4018 (fis)
03400 DNA repair and recombination proteins [BR:
ecoh03400
]
ECRM13516_4018 (fis)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECRM13516_4018 (fis)
Chromosome and associated proteins [BR:
ecoh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ECRM13516_4018 (fis)
DNA repair and recombination proteins [BR:
ecoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ECRM13516_4018 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
Baseplate_J_C
INT1_R3
DUF3333
Phage_NinH
Cache_WalK
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHG16643
LinkDB
All DBs
Position
3984293..3984589
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaacccaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaatggtcaggatgtgaatgacctctatgagctggtactggctgaagtagaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgcactgatg
atgggcatcaaccgtggtacgctgcgtaaaaaattgaaaaaatacggcatgaactaa
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