KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4041
Entry
ECRM13516_4041    CDS       T03011                                 
Symbol
yrdD
Name
(GenBank) C-terminal Zn-finger domain of DNA topoisomerase I-like protein
  KO
K07479  putative DNA topoisomerase
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    ECRM13516_4041 (yrdD)
SSDB
Motif
Pfam: Zn_ribbon_Top1 CoiA_N DUF7340 Zn_Ribbon_1 DNA_ligase_ZBD Zn_Ribbon_TF Zn_ribbon_3 Zn_ribbon_FGT1_2 Trm112p Zn_ribbon_InsA DUF5817 Zn_ribbon_RPB9 HMBD HVO_2753_ZBP
Other DBs
NCBI-ProteinID: AHG16659
LinkDB
Position
complement(4004284..4004826)
AA seq 180 aa
MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLE
GQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSR
YGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE
NT seq 543 nt   +upstreamnt  +downstreamnt
atggcaaaatcagcactgttcacggtgcgtaataatgagtcctgcccaaagtgcggggct
gaactggttattcgatccgggaaacacggtccgtttcttggctgctcacagtatccggcg
tgtgactacgtccgtcctctgaaatcttcagcggatggacatatcgtcaaagttctggag
gggcaggtttgccctgcatgtggcgcaaatctggtattacgccagggacgctttggtatg
tttattggttgtagtaactaccctgaatgcgaacataccgaacttatcgataaaccggac
gaaacagcaattacatgcccccaatgtcggacgggccatctggtccagcgccgctcccgt
tatggcaaaacatttcactcctgtgatcgctacccggagtgtcaatttgccattaacttc
aaacccatagctggagaatgccctgagtgtcattatccgctactcatcgaaaagaaaacc
gcgcagggtgtaaaacacttttgtgccagtaaacaatgtggaaagccggtttcggcggaa
taa

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