Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4053
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Entry
ECRM13516_4053 CDS
T03011
Symbol
rpsD
Name
(GenBank) SSU ribosomal protein S4p (S9e)
KO
K02986
small subunit ribosomal protein S4
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ECRM13516_4053 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ecoh03011
]
ECRM13516_4053 (rpsD)
Ribosome [BR:
ecoh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ECRM13516_4053 (rpsD)
Bacteria
ECRM13516_4053 (rpsD)
Archaea
ECRM13516_4053 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
Orbi_VP4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AHG16671
LinkDB
All DBs
Position
complement(4013919..4014527)
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AA seq
202 aa
AA seq
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MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRI
YGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIM
VNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKR
KPERSDLSADINEHLIVELYSK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgggtcctaagctcaagctgagccgtcgtgagggcaccgacttattccttaagtctggc
gttcgcgcgatcgataccaagtgtaaaattgaacaagctcctggccagcacggtgcgcgt
aaaccgcgtctgtctgactatggtgtgcagttgcgtgaaaagcaaaaagttcgccgtatc
tatggtgtgctggagcgtcagttccgtaactactacaaagaagcagcacgtctgaaaggc
aacaccggtgaaaacctgttggctctgctggaaggtcgtctggacaacgttgtataccgt
atgggcttcggtgccactcgtgcagaagcacgtcagctggttagccataaagcaattatg
gtaaacggtcgtgttgttaacatcgcttcttatcaggttagtccgaatgacgttgtaagc
attcgtgagaaagcgaagaagcagtctcgcgtgaaagccgctctggagctggctgagcag
cgtgaaaagccaacctggctggaagttgatgctggcaagatggaaggtacgtttaagcgt
aagccggagcgttctgatctgtctgcggacattaacgaacacctgatcgtcgagctttac
tccaagtaa
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