KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4134
Entry
ECRM13516_4134    CDS       T03011                                 
Symbol
yrfC
Name
(GenBank) Type IV pilus biogenesis protein PilN
  KO
K12289  pilus assembly protein HofN
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_4134 (yrfC)
Secretion system [BR:ecoh02044]
 Type II secretion system
  Type IVa pilus homolog protein
   ECRM13516_4134 (yrfC)
SSDB
Motif
Pfam: PilN
Other DBs
NCBI-ProteinID: AHG16752
LinkDB
Position
complement(4073965..4074504)
AA seq 179 aa
MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTSSAEARVDAVLLQGEQQ
LARSLQITKPRLLERQQIREQRLQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQG
TLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL
NT seq 540 nt   +upstreamnt  +downstreamnt
atgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttcttcgt
ttctggttgctgatgttcgttgcgcctctgctgctggccgtcgggataacgctaatactg
cgtctgacaagcagcgccgaagctcgcgtagacgccgttttgcttcagggggaacaacaa
ctcgcccgcagcttacagataacgaaaccacgtttgctggagcgccaacaaattcgtgag
cagcgtttgcaaaggcagcgccagcgacaatttacccgcgactggcaatctgcgctggaa
gcactggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcaggga
acgctggagatcaaggggctgacaacaagcattaccgcgttaaacgcactagaaacgtca
ctccgccaggatgcatcttttcatctcaatcagcggggggccacgcagcaggatgcgcag
ggacgctggcaatttgagtatcagttaacaaggaaggttagcgatgaacatgttctttga

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