Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4304
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Entry
ECRM13516_4304 CDS
T03011
Symbol
gadX
Name
(GenBank) HTH-type transcriptional regulator gadX
KO
K21905
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_4304 (gadX)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECRM13516_4304 (gadX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
AHG16922
LinkDB
All DBs
Position
complement(4244658..4245482)
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AA seq
274 aa
AA seq
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MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS
LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
ERSAQRLSNRDSAASIVAQGNFYGTDCSAEGIRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcactacatgggaattgtctaattgcgtacgcaagacataaatatattctcacc
atggttaatggtgaatatcgctattttaatggcggtgacttggtttttgcggatgcaagc
caaattcgagtagataagtgtgttgaaaattttgtatttgtgtcaagggacacactttca
ttatttctcccgatgctcaaggaggaggcattaaatcttcatgcacataaaaaagtttct
tcattactcgttcatcactgtagcagagatattcctgtttttcaggaagttgcgcaacta
tcgcagaataagaatcttcgctatgcagaaatgctacgtaaaagagcattaatctttgcg
ttgttatctgtttttcttgaggatgagcactttataccgctgcttctgaacgttttacaa
ccgaacatgcgaacacgagtttgtacggttatcaataataatatcgcccatgagtggaca
ctagcccgaatcgccagcgagctgttgatgagtccaagtctgttaaagaaaaaattgcgc
gaagaagagacatcatattcacagttgcttactgagtgtagaatgcaacgtgctttgcaa
cttattgttatacatggtttttcaattaagcgagttgcagtatcctgtggatatcacagc
gtgtcgtatttcatttacgtctttcgaaattattatgggatgacgcccacagagtatcag
gagcgatcggcgcagagattgtcgaaccgtgactcggcggcaagtattgttgcgcaaggg
aatttttacggcactgactgttctgcggaaggaataagattatag
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