Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4381
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Entry
ECRM13516_4381 CDS
T03011
Symbol
selB
Name
(GenBank) Selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ecoh03012
]
ECRM13516_4381 (selB)
Translation factors [BR:
ecoh03012
]
Eukaryotic type
Elongation factors
ECRM13516_4381 (selB)
Prokaryotic type
ECRM13516_4381 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
GTP_EFTU_D4
HrcA
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AHG16998
LinkDB
All DBs
Position
complement(4336546..4338390)
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AA seq
614 aa
AA seq
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MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG
HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA
RVDEVERQVKEVLREYGFAEAKLFITAAIEGRGIDALREHLLQLPEREHASQHSFRLAID
RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAHAGQRIALN
IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL
ENNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA
RAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ
RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDILSHHGWLHL
PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV
KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG
NDHLLRDALLFPEK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattattgcgactgccggacacgttgaccacggcaaaacaaccttattgcaggcgatt
actggcgtaaatgccgatcgtctgccggaagaaaaaaagcgcggcatgaccatcgatctc
ggctatgcctactggccgcagccggatggtcgcgtgcctggttttatcgacgtacccggt
catgaaaagtttctttccaacatgctggcgggcgttggtggtatcgatcacgcgctgttg
gtggtggcgtgcgatgacggtgtgatggcacagacccgtgagcatctggcgattttgcag
ctgaccggtaacccgatgctgacagtggcgctgaccaaagccgatcgcgtggacgaagcg
cgtgttgatgaggttgaacgtcaggtaaaggaggtgctgcgggaatacggttttgctgag
gcaaaactgtttatcaccgcagcaatcgaaggtcggggaattgatgccctgcgcgagcat
ctgcttcagttaccagaacgtgaacacgccagccaacatagtttccgcctcgcgatcgac
cgcgcatttaccgtaaaaggtgccgggctggtcgtcaccggtacggcgttaagcggggaa
gtgaaggtaggcgattcactatggctgactggtgtaaataaaccgatgcgtgtacgtgca
ctgcatgcacaaaaccagccaacagaaaccgctcatgccggccagcgtatcgcgcttaac
atcgcgggggatgcggaaaaagagcagattaaccgtggcgactggctgcttgccgatgtg
ccgccagagccgttcacgcgggtgattgtcgagcttcaaacccatacgccgctgacccag
tggcagccgctgcatattcaccacgccgccagccacgttacgggacgcgtttcgctgctg
gaaaataaccttgccgagctggtgttcgacacgccgctgtggctggcggataacgatcgc
ttagtgttgcgcgatatctcggcccgcaatacgctggcgggggcgcgtgtggtgatgctt
aacccgccgcgtcgcggtaaacgtaagccggaatatctgcaatggctggcgtctcttgca
cgggcgcagagcgatgccgatgcgttatctgttcatctggaacgcggagcggttaacctt
gcggatttcgcctgggcgcgccagctcaacggcgaagggatgcgcgaactgctgcaacag
ccgggctatattcaggctggttatagcttgttgaatgcgccagttgccgcccgctggcag
cggaaaattcttgacacattagcgacttatcatgagcaacatcgcgatgaacctggtcct
gggcgcgagcgtctgcggcgcatggcgttgccaatggaagatgaagcgctggtactgttg
ctgattgaaaagatgcgtgaaagcggcgacatcctcagtcatcacggctggctgcatctg
ccagatcacaaagcgggcttcagcgaagagcagcaggccatctggcaaaaagcagagccg
ctgtttggtgacgaaccgtggtgggtgcgtgacctggcaaaagagacgggaaccgacgag
caggcaatgcgtctgacgctacgccaggcggcccaacaggggataattaccgcgatcgtc
aaagatcgttattaccgtaacgatcggattgtcgagtttgccaatatgatccgcgatctc
gatcaggaatgtggttcaacctgcgcggcggatttccgcgatcgcttaggggttgggcga
aaactggcgattcaaatcctggaatattttgaccgcattggctttacgcgtcgtcgtgga
aatgatcatttattgcgcgacgcattattatttccggaaaaataa
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