Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4405
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Entry
ECRM13516_4405 CDS
T03011
Symbol
yibD
Name
(GenBank) Beta-1,3-galactosyltransferase / Beta-1,4-galactosyltransferase
KO
K19354
heptose III glucuronosyltransferase [EC:2.4.1.-]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECRM13516_4405 (yibD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
ECRM13516_4405 (yibD)
Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
Core region
ECRM13516_4405 (yibD)
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Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
AHG17022
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Position
complement(4365771..4366805)
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AA seq
344 aa
AA seq
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MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKYYAENY
PHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQC
NADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNN
IKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYI
KITRLLEKLNRNYADKITIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMY
KRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagcaccaataaacttagtgttattattccgttatataatgcgggcgatgat
ttccgtacttgtatggaatctttaattacgcaaacctggactgctctggaaatcattatt
attaacgatggttcaacggataattctgttgaaatagcaaagtattacgcagaaaactat
ccgcacgttcgtttgttgcatcaggcgaatgctggcgcatcggtggcgcgtaatcgtggg
attgaagtggcaacgggcaaatatgtcgcttttgtcgatgctgacgatgaagtctatccc
accatgtacgaaacgctgatgaccatggcgttagaggacgacctcgacgtggcgcagtgc
aacgctgactggtgttttcgtgaaacgggagaaacctggcaatccatccccaccgatcgc
cttcgctcaaccggcgtcttaaccggcccggactggctgcggatggggctttcttcgcgc
cgttggacacacgtggtctggatgggggtttatcgccgcgatgttattgttaaaaataac
attaaatttattgccggattacatcatcaggatattgtctggacaacagaattcatgttt
aacgcgctgcgtgcgcgatataccgagcaatcattatataaatattatctgcataatacg
tcagtgagtcggttgcatagacaagggaataaaaaccttaattatcaacgtcactatatt
aagattacccgcctgctggagaaattaaatcgaaattatgccgacaaaattacgatttat
ccggaatttcatcagcaaataacttacgaagcattgcgtgtttgccatgcggtgcgcaaa
gagccggatattcttacccgccaacggatgattgccgagatatttacttccggtatgtat
aagcgcctgattaccaatgtgcgcagcgtgaaggtgggttaccaggcgttactgtggtct
ttccgcttatggcaatggcgcgacaaaacgcggtcgcaccatcgcattacgcgtagcgcc
tttaatttgcgctag
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