Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4420
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Entry
ECRM13516_4420 CDS
T03011
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00540
Lipopolysaccharide biosynthesis
ecoh01100
Metabolic pathways
Module
ecoh_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECRM13516_4420 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
ECRM13516_4420 (kdtA)
Enzymes [BR:
ecoh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
ECRM13516_4420 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
ECRM13516_4420 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
ECRM13516_4420 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
ECRM13516_4420 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
Lipid A
ECRM13516_4420 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
PCC_BT
Motif
Other DBs
NCBI-ProteinID:
AHG17037
LinkDB
All DBs
Position
4382162..4383373
Genome browser
AA seq
403 aa
AA seq
DB search
MRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITV
TTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALH
KRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVT
VTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNL
LLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLA
FVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATSLAKEVS
SLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggacgtaaggctccggcctatcgaaaacgctggggtgaacgttacggtttttac
cgccatccgctaaaaccaggcggcattatgctgcactccgtctccgtcggtgaaactctg
gcggcgatcccgttggtgcgcgcgctgcgtcatcgttatcctgatttaccgattaccgtt
acaaccatgacgccaaccggttcggagcgcgtacaatcggctttcgggaaggatgttcag
cacgtttatctgccgtatgacctgcccgatgcacttaatcgtttcctgaataaagtcgac
cctaaactggtgttgattatggaaaccgaactatggcctaacctgattgcggcgctacat
aaacgtaaaattccgctggtgatcgctaacgcgcgactctctgcccgctcggccgcaggt
tatgccaaactgggtaaattcgtccgtcgcttgctgcgtcgtattacgctgattgccgcc
caaaatgaagaagatggtgcacgttttgtggcgctgggcgcaaaaaataaccaggtaacc
gttaccggtagcctgaaattcgatatttctgtaacgccgcagttggctgctaaagccgtg
acgctgcgccgccaatgggcaccacaccgcccggtatggattgccaccagcactcacgaa
ggcgaagagagtgtggtgatcgccgcacatcaggcattgttacagcaattcccgaattta
ttgctcatcctggtaccccgtcatccggaacgcttcccggatgcgattaaccttgtccgc
caggctggactaagctatatcacacgctcctcaggggaagttccctccaccagcacgcag
gttgtggttggcgatacgatgggcgagttgatgttactgtatggcattgccgatctcgcc
tttgttggcggttcactggttgaacgtggtgggcataatccgctggaagctgccgcacac
gctattccggtattgatggggccgcatacttttaactttaaagacatttgcgcgcggctg
gagcaggcaagcgggctgattaccgttaccgatgccacgtcgcttgcaaaagaggtttcc
tctttactcaccgacgccgattaccgtagtttctatggccgtcatgccgttgaagtactg
tatcaaaaccagggcgcgctacagcgtctgcttcaactgctggaaccttacctgccaccg
aaaacgcattga
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