KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4475
Entry
ECRM13516_4475    CDS       T03011                                 
Symbol
escD
Name
(GenBank) EscD
  KO
K03220  type III secretion protein D
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_4475 (escD)
Secretion system [BR:ecoh02044]
 Type III secretion system
  Type III secretion core apparatus
   ECRM13516_4475 (escD)
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Y4YQ_C Yop-YscD_ppl_1st
Other DBs
NCBI-ProteinID: AHG17090
LinkDB
Position
4429030..4430250
AA seq 406 aa
MLSSYKIKLLNGAMRNRELQLPMGNLTLGTEDNDIVYFPLEQGLNQFLLDIREEGVFLLS
PVEFWIDGQPTPYEADKPLPVGKVIDIAGCCFIIGDIDHSLPLSDVPERFSAKSRRKKRL
ILASVIGATFALSGAIGSYVLLSPKAEPPTFTRADVYQQLKENKLHAITLVWHGKNIALY
GRCESTTDLTPFFNYLKEKNIFYYNNIICNNQIISAINDVLTEYGYKDIIITKGNKPGFF
LLSGYIPPSPKWSEVENLLLNTPGVAGWEIHNNSNNKINELASEFKKNKLINYVNIFKKN
DVIIVAGEVSQQNESKILAIINAMNKNSNAKILFQNIQPYISADIFPGKILRISGTMKNP
TIALDNGTSLGIGSILKGGYVIDAIDPKDGINISRPDEYIHIPLSY
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgttatcctcatataaaataaaacttctcaatggtgcgatgcgtaatcgggaattacaa
cttccgatgggaaacctaacgctaggtacggaagataacgatattgtttactttcccctt
gaacaaggcctcaatcagtttttacttgatatacgtgaggaaggtgttttccttttatct
ccggttgaattttggattgatgggcaacccacgccctatgaagcagataaaccattacct
gtcggaaaggttattgatatagcgggatgttgcttcatcattggtgatattgaccattcc
ttgccattgtctgatgtgccagaaaggttctctgccaaaagtcgacgcaaaaaacgcctt
atcctggcgagcgtgattggtgctacttttgcgttgtctggtgccatcggcagttacgtt
ttgctttccccaaaagctgaacccccaacgtttaccagagctgatgtatatcagcagcta
aaagaaaacaaacttcatgcaatcactctggtatggcatgggaaaaatatcgcgctttat
gggcgttgcgaatcaaccacggatttaactccattttttaactacctaaaagaaaaaaat
attttttattacaataatattatttgcaataaccaaatcatatccgcaattaatgatgtc
ttaacggaatacggttacaaagatatcattattacaaaaggtaataagcctggattcttt
ctgttatcgggatacattcccccttcacccaaatggagcgaggttgaaaatctgttactg
aatacgccaggagttgcaggatgggaaatacacaacaacagtaacaataaaatcaatgaa
ctggcatcagagtttaaaaagaataaactaataaactatgtcaatattttcaaaaagaat
gatgtcatcattgttgcgggggaagtttctcaacagaatgagagtaagatccttgccatt
ataaatgcaatgaacaaaaatagtaacgccaagatactctttcagaacattcagccgtac
atttcagcagatattttccccggaaaaatactcagaatcagcggtacgatgaagaatcca
acaattgctcttgataatggcaccagcctggggattggtagcattctgaaaggaggctat
gtcatagacgcgattgatcctaaagatggtatcaacatctcccgcccagacgaatatata
catattccactgtcgtattaa

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