Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4587
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Entry
ECRM13516_4587 CDS
T03011
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoh03016
]
ECRM13516_4587 (gidA)
03036 Chromosome and associated proteins [BR:
ecoh03036
]
ECRM13516_4587 (gidA)
Transfer RNA biogenesis [BR:
ecoh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECRM13516_4587 (gidA)
Prokaryotic type
ECRM13516_4587 (gidA)
Chromosome and associated proteins [BR:
ecoh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ECRM13516_4587 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
HI0933_like
Pyr_redox_2
Thi4
DAO
Pyr_redox
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AHG17201
LinkDB
All DBs
Position
complement(4542042..4543931)
Genome browser
AA seq
629 aa
AA seq
DB search
MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV
PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatccggatccttttgacgtcatcatcattggtgggggtcatgcaggcaccgag
gccgcgatggccgcggcgcgtatgggtcaacagactctgcttttgacacacaatatcgac
actctggggcagatgagctgcaacccggcgatcggcggtattgggaagggacatctggta
aaagaagtggatgcactcggcggtctgatggcgaaagcgatcgatcaggcgggtatccag
tttaggatactaaacgcaagcaaaggaccggcggttcgcgctacccgcgctcaggcggat
cgtgtgctctaccgtcaggcggtacgcacggcgctggagaaccaaccgaacctgatgatc
ttccagcaggctgttgaagatcttattgtcgaaaacgatcgcgtggtcggtgctgttacc
caaatgggactgaagttccgtgccaaagccgtcgtgctcaccgttgggacgttcctcgac
ggtaaaattcatatcggtctggataattacagcggtggccgtgctggtgatccgccgtcc
attccgctttctcgccgtttgcgtgaactgccgctgcgcgttggtcgtctgaaaaccggg
acaccaccgcgtattgatgctcgaaccatcgactttagcgtactggcgcaacagcatggc
gataacccaatgccggtattctcgtttatgggcaatgcgtcccagcatccccagcaggtg
ccgtgttatatcactcataccaacgagaaaacccatgatgtgatccgcagtaacctcgat
cgtagcccaatgtacgcaggggtgatcgaaggtgtcggcccacgctactgcccgtcgatc
gaagacaaagtcatgcgcttcgccgacagaaatcagcatcagatcttccttgaaccggaa
gggctgacctctaacgaaatttatccgaacggtatctccaccagcctgccgttcgatgtg
cagatgcaaatcgtccgctccatgcaggggatggaaaacgcgaagatcgtgcgtccgggt
tatgccattgagtatgacttcttcgatccacgcgacctgaaaccgacgctggagagcaag
tttatccaggggctgttctttgctggtcagattaacggcactaccggttacgaagaagcc
gctgcgcaaggtttgctggccggtcttaacgctgcccgtctgtctgctgacaaagaaggt
tgggctccggcgcgttctcaggcgtatctcggcgtactggttgatgacctgtgcacttta
ggaaccaaagaaccgtatcgtatgtttacttcgcgcgcagaatatcgtctgatgctgcgc
gaagataatgcggatctgcgtttgactgaaatcggtcgtgaactgggcctggtggatgac
gaacgttgggcgcgctttaacgagaaacttgagaatatcgagcgtgagcgtcagcgtctg
aaatcgacctgggtaaccccgtcggcggaagctgcagccgaagtgaatgctcacctgact
gcgccgctttcccgtgaagccagtggtgaagatctgctgcgtcgtccggaaatgacttat
gaaaaattaaccacgctgacgccgtttgcccctgcgttgacagacgaacaggcggcggaa
caggttgagattcaggttaaatacgaaggttatatcgcgcgccagcaagatgagatcgaa
aagcagctgcgtaacgagaacaccctgctacccgcgacactggattaccgccaggtatcc
ggtctttctaacgaagtgatcgccaaacttaacgatcacaaaccggcctctatcggccag
gcttcacgtatttctggcgtcacgcctgcggctatctccattctgctggtgtggctgaaa
aaacagggtatgctgcgtcgtagcgcataa
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