Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5090
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Entry
ECRM13516_5090 CDS
T03011
Symbol
valS_2
Name
(GenBank) Valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ECRM13516_5090 (valS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecoh01007
]
ECRM13516_5090 (valS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoh03016
]
ECRM13516_5090 (valS_2)
Enzymes [BR:
ecoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
ECRM13516_5090 (valS_2)
Amino acid related enzymes [BR:
ecoh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
ECRM13516_5090 (valS_2)
Transfer RNA biogenesis [BR:
ecoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ECRM13516_5090 (valS_2)
Prokaryotic type
ECRM13516_5090 (valS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1f
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AHG17675
LinkDB
All DBs
Position
5068394..5071249
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AA seq
951 aa
AA seq
DB search
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD
TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE
SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR
TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP
RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI
LTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH
DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSA
LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHT
VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEK
QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQD
CGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELT
KPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQP
FPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNEN
RGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIE
GEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatacaacccacaagatatcgaacagccgctttacgagcactgggaaaag
cagggctactttaagcctaatggcgatgaaagccaggaaagtttctgcatcatgatcccg
ccgccgaacgtcaccggcagtttgcatatgggtcacgccttccagcaaaccatcatggat
accatgatccgctatcagcgcatgcagggcaaaaacaccctgtggcaggtcggtactgac
cacgccgggatcgctacccagatggtcgttgagcgcaagattgccgcagaagaaggtaaa
acccgtcacgactacggccgcgaagctttcatcgacaaaatttgggaatggaaagcggaa
tccggcggcacgattacccgtcagatgcgccgtctcggcaactccgtcgactgggagcgt
gaacgcttcaccatggacgaaggcctgtccaatgcggtgaaagaagttttcgttcgtctg
tataaagaagacctgatttaccgtggcaaacgcctggtaaactgggatccgaaactgcgc
accgctatctctgacctggaagtcgaaaaccgcgaatcgaaaggttcgatgtggcacatc
cgctatccgctggctgacggtgcgaaaaccgcagacggtaaagattatctggtggtcgcg
actacccgtccagaaaccctgctgggcgatactggcgtagccgttaacccggaagatccg
cgttacaaagatctgattggcaaatatgtcattctgccgctggttaaccgtcgtattccg
atcgttggcgacgaacacgccgacatggaaaaaggcaccggctgcgtgaaaatcactccg
gcgcacgactttaacgactatgaagtgggtaaacgtcacgccctgccgatgatcaacatc
ctgacctttgacggcgatatccgtgaaagcgcccaggtgttcgataccaaaggtaacgaa
tctgacgtttattccagcgaaatccctgcagagttccagaaactggagcgttttgctgca
cgtaaagcagtcgttgccgcagttgacgcgcttggcctgctggaagaaattaaaccgcac
gacctgaccgttccttacggcgaccgtggcggcgtagttatcgaaccaatgctgaccgac
cagtggtacgtgcgtgccgatgtcctggcgaaaccggcggttgaagcggttgagaacggc
gacattcagttcgtaccgaagcagtacgaaaacatgtacttctcctggatgcgcgatatt
caggactggtgtatctctcgtcagttgtggtggggtcaccgtatcccggcatggtatgac
gaagcgggtaacgtttatgttggccgcaacgaagacgaagtgcgtaaagaaaataacctc
ggtgctgatgttgtcctgcgtcaggacgaagacgttctcgatacctggttctcttctgcg
ctgtggaccttctctacccttggctggccggaaaataccgacgcccttcgtcagttccac
ccaaccagcgtgatggtatctggtttcgacatcattttcttctggattgcccgcatgatc
atgatgaccatgcacttcatcaaagatgaaaatggcaaaccgcaggtgccgttccacacc
gtttacatgaccggcctgattcgtgatgacgaaggccagaagatgtccaaatccaagggt
aacgttatcgacccactggatatggttgacggtatttcgctgccagaactgctggaaaaa
cgtaccggcaatatgatgcagccgcagctggcggacaaaatccgtaagcgcaccgagaag
cagttcccgaacggtattgagccgcacggtactgacgcgctgcgcttcaccctggcggcg
ctggcgtctaccggtcgtgacatcaactgggatatgaagcgtctggaaggttaccgtaac
ttctgtaacaagctgtggaacgccagccgctttgtgctgatgaacacagaaggtcaggat
tgcggcttcaacggcggcgaaatgacgctgtcgctggcggaccgctggattctggcggag
ttcaaccagaccatcaaagcgtaccgcgaagcgctggacagcttccgcttcgatatcgcc
gcaggcattctgtatgagttcacctggaaccagttctgtgactggtatctcgagctgacc
aagccggtaatgaacggtggcaccgaagcagaactgcgcggtactcgccatacgctggtg
actgtactggaaggtctgctgcgcctcgcgcatccgatcattccgttcatcaccgaaacc
atctggcagcgtgtgaaagtactttgcggtatcactgccgacaccatcatgctgcagccg
ttcccgcagtacgatgcatctcaggttgatgaagccgcactggccgacaccgaatggctg
aaacaggcgatcgttgcggtacgtaacatccgtgcagaaatgaacatcgcgccgggcaaa
ccgctggagctgctgctgcgtggttgcagcgcggatgcagaacgtcgcgtaaatgaaaac
cgtggcttcctgcaaaccctggcgcgtctggaaagtatcaccgtgctgcctgccgatgac
aaaggtccggtttccgttacgaagatcatcgacggtgcagagctgctgatcccgatggct
ggcctcatcaacaaagaagatgagctggcgcgtctggcgaaagaagtggcgaagattgaa
ggtgaaatcagccgtatcgagaacaaactggcgaacgaaggctttgtcgcccgcgcaccg
gaagcggtcatcgcgaaagagcgtgagaagctggaaggctatgcggaagcgaaagcgaaa
ctgattgaacagcaggctgttatcgccgcgctgtaa
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