Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5097
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Entry
ECRM13516_5097 CDS
T03011
Symbol
yjgJ
Name
(GenBank) Putative HTH-type transcriptional regulator YjgJ, TetR family
KO
K19335
TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_5097 (yjgJ)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECRM13516_5097 (yjgJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AHG17682
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All DBs
Position
complement(5077206..5077799)
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AA seq
197 aa
AA seq
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MVTKKQSCVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSK
AGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIH
SHDPLARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQL
CATAALAGEAIKTLLKE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggtcactaaaaaacaatcttgcgttccaggtcgtcccagacgtttcgctcctgagcag
gcaatctctgcggcaaaagtgctttttcaccaaaaaggtttcgatgctgtcagtgttgct
gaagttactgattatcttggtattaaccccccgagcctctacgcggcttttggcagtaaa
gctgggttatttagccgtgtactcaatgaatacgtcggtacggaagctattccgcttgcc
gatattcttcgtgatgatcgtccggtaggcgagtgcctggttgaggtattaaaagaagcg
gcgcgcagatatagccaaaacggcggctgcgctggctgtatggttcttgaaggtattcat
agtcatgatccactagcgcgtgatattgccgttcaatattatcacgccgcagaaacgacc
atttatgactatatcgccaggcggcatccacaaagcgcacaatgtgtgactgattttatg
agtaccgtgatgtcagggctttctgcgaaggcacgggaggggcactcaatcgaacaactc
tgtgcaacagctgcactggcgggggaagcgataaaaactcttctcaaggagtga
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