Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5204
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Entry
ECRM13516_5204 CDS
T03011
Symbol
groEL
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECRM13516_5204 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoh03019
]
ECRM13516_5204 (groEL)
03110 Chaperones and folding catalysts [BR:
ecoh03110
]
ECRM13516_5204 (groEL)
03029 Mitochondrial biogenesis [BR:
ecoh03029
]
ECRM13516_5204 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecoh04147
]
ECRM13516_5204 (groEL)
Enzymes [BR:
ecoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ECRM13516_5204 (groEL)
Messenger RNA biogenesis [BR:
ecoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ECRM13516_5204 (groEL)
Chaperones and folding catalysts [BR:
ecoh03110
]
Heat shock proteins
HSP60 / Chaperonin
ECRM13516_5204 (groEL)
Mitochondrial biogenesis [BR:
ecoh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ECRM13516_5204 (groEL)
Exosome [BR:
ecoh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ECRM13516_5204 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ECRM13516_5204 (groEL)
Exosomal proteins of breast cancer cells
ECRM13516_5204 (groEL)
Exosomal proteins of colorectal cancer cells
ECRM13516_5204 (groEL)
Exosomal proteins of bladder cancer cells
ECRM13516_5204 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHG17786
LinkDB
All DBs
Position
complement(5178590..5180236)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaacatgggtgcgcagatggtgaaagaagttgcctccaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgaaggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagctgttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgac
tctaaagcgattgctcaggttggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctatctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagctgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagatgtagaaggcgaagcgctggca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcagttaaagctccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggcgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagacgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtcctgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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