Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5326
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Entry
ECRM13516_5326 CDS
T03011
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit, unknown substrate 8
KO
K11690
TRAP-type transport system large permease protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECRM13516_5326
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_5326
Transporters [BR:
ecoh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ECRM13516_5326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DcuC
DUF8119
PP_kinase_C_1
Motif
Other DBs
NCBI-ProteinID:
AHG17907
LinkDB
All DBs
Position
complement(5297143..5298414)
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AA seq
423 aa
AA seq
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MSWLLIIPLMIVCLFLNIRVYLAMFIGIIAYFLFFSSVPIEIAVQRLIAPTQSPSLLAIP
FFILLGTLMSYTGIAERILHIANVLVGKMRGGLGVANILVSTMMGGVSASNLADAAMLSR
MMVPEMERKGYNRAFAAAITAGGSLVTPIIPPGIALIIYGLVADVSIGKMFIAGLVPGLL
CAVVLMFTVYLVARKTNAKPSRESWPTGKEVVFSLGQAWPALFLIFAVVGGIRANIFTPT
EAGAAAVLIVLAIGFFIYREMRISHVVKALGETARATASVMLVIMASAALGWIFSMEHAG
VAVANFVTSLTENKYMFLLIINILLLTLGMFLEGNAILLILVPLLKPVVEHFGIDPVHFG
IIMIFNLSIGAFTPPVGTVMLLVCNITQVSVGNFFKQSLPLLAALLLMLMLVTYIPAISL
FLV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttattgattattccgctaatgatcgtctgtttgtttctcaacattcgggtc
tatctggcgatgtttattggcatcatcgcttactttttattcttctccagcgtaccgatt
gaaattgccgtgcaaagactgatcgcgccaacgcaaagcccatcattgctggcaattccg
ttttttatcttgctcggcacactaatgagctacaccggcattgccgaacgcatcctgcac
attgccaacgttctggtggggaaaatgcgcggcggacttggcgtggcaaacattctcgtc
agcaccatgatgggcggcgtcagcgcctctaaccttgctgacgcggcgatgctgtcgcgc
atgatggtgccggagatggagcgtaaaggctacaatcgcgcatttgccgccgccattacc
gctggtggctcgttagtcaccccgatcataccgccgggaatagccctgattatttacggt
ctggttgccgacgtctctatcggaaaaatgtttatcgccggtctggtacctggtttgcta
tgcgcagtcgtcctgatgtttaccgtctacctggtcgcccgcaaaactaacgctaaaccc
tcgcgtgaaagctggcctacgggcaaagaggtggtgttctcgctggggcaggcctggcct
gcgctgttcctcatttttgctgtggtgggtggtattcgcgctaacattttcaccccaaca
gaagcaggtgcagcagcggtgctaatcgtgctggcgattggcttttttatctatcgtgaa
atgcggatttctcatgtcgtcaaagcattgggcgaaacggcacgcgcaaccgcatcggtg
atgctggtaatcatggccagcgccgcgttgggatggattttctcaatggaacatgctggt
gtcgcagtggcgaattttgtgacttcgctgaccgaaaataaatatatgttcctgttaatt
atcaacatattgctgctgacgctggggatgtttctggaaggaaacgccattttgctgatc
ctggtaccactattaaaaccggtggtcgaacactttggcatcgatccggtgcattttggc
atcatcatgatcttcaacctgtcgattggcgcattcacgccaccggtaggtaccgtgatg
ctgctggtatgtaacatcacgcaagtttcggtgggaaatttctttaaacaatccctgcct
ctactggcggctctactattaatgctaatgctggtgacatatatcccggcgatttcactg
ttcctggtttaa
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