KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5330
Entry
ECRM13516_5330    CDS       T03011                                 
Symbol
yjjM
Name
(GenBank) Regulator of L-galactonate catabolism YjjM
  KO
K23015  GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecoh03000]
    ECRM13516_5330 (yjjM)
Transcription factors [BR:ecoh03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    ECRM13516_5330 (yjjM)
SSDB
Motif
Pfam: GntR FCD Rrf2 HTH_Crp_2 HTH_11 HVO_A0261_N Phage_rep_O HTH_24 PspC HTH_IclR Mab-21_C HTH_DeoR CENP-B_N TrmB
Other DBs
NCBI-ProteinID: AHG17911
LinkDB
Position
complement(5302421..5303326)
AA seq 301 aa
MSRSQNLRHNVINQVIEDMARGNIPSPLPSQSGLAEMYNISRTTVRHILQHLSACGVLTL
VGKNYVIARKPEQNDGFDCITASLKEQNRLFEQAFFTMINLRQLRAGESFSELQLARAAG
VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD
DDPRWLQAKTMLERHRTLRDSIGSNFRMFSQLDRDFHAMLLSAADNIFFNQSLEIISVIF
HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDAITALRNHLDTAKQSMIRSIRQHH
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagtcgttcgcagaatttacgtcataacgtcataaatcaggtaattgaagatatggcg
aggggcaatattccttctccgctgccttcacaaagcgggctggcagaaatgtataacatc
agtcgcactacggtacgccacatactccagcatttaagcgcatgtggcgtgctcaccctg
gtggggaaaaattatgttatcgcccgcaaacccgaacagaacgatggatttgattgcatc
acggcctcgctgaaagagcaaaaccgtcttttcgagcaggcatttttcaccatgattaac
ctgcgtcagttacgcgccggagaaagcttttccgaacttcagctggcgcgagcggcaggc
gtcagtccggtagtggtgcgagaatatcttttgaaattcggtcgttataatcttattcaa
agcgaaaagcgcggccagtggagcatgaagcagttcgatcaatcctacgccgagcagctg
tttgagctacgcgaaatgctcgaaacacattccctgcaacactttctcaaccttcccgat
gacgatccccgctggttgcaggcgaaaaccatgctcgaacgtcacaggacattgcgcgac
agcattggcagcaactttcggatgttttctcaattagaccgtgattttcatgccatgctg
ttatccgctgctgacaacatcttttttaatcaatcacttgaaattatctcggtgatcttt
cattttcactatcaatgggatgaaagcgatctcaagcagcgcaatatcattgctgttgat
gagcatatgaccattctcagcgccctgatttgccgtagcgatttagatgcaataacggca
ttgcgaaaccatctggataccgccaaacaatcaatgattcgttccatcaggcaacatcac
cgataa

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