Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_00657
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Entry
ECOPMV1_00657 CDS
T02847
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi03030
DNA replication
ecoi03430
Mismatch repair
ecoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECOPMV1_00657 (holA)
03430 Mismatch repair
ECOPMV1_00657 (holA)
03440 Homologous recombination
ECOPMV1_00657 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecoi03032
]
ECOPMV1_00657 (holA)
03400 DNA repair and recombination proteins [BR:
ecoi03400
]
ECOPMV1_00657 (holA)
Enzymes [BR:
ecoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECOPMV1_00657 (holA)
DNA replication proteins [BR:
ecoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECOPMV1_00657 (holA)
DNA repair and recombination proteins [BR:
ecoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECOPMV1_00657 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
BET
Motif
Other DBs
NCBI-ProteinID:
CDH64164
LinkDB
All DBs
Position
complement(688713..689744)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMSEALNRLSQSQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtcgctgcggcgcaagggttcgaagaacaccacactttttccattgatcccaacaccgac
tggaatgcgattttttcgttatgccaggccatgagcctgtttgccagtcgacaaacgcta
ttgctgttgttacccgaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagctgccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgctgcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggcccaggcactggagcgtttatcgctactctggccggacggcaaactgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgaaccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgcaggggcatgatgagcgaggcgttaaatcgcttaagccagtcgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagcttgaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga
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