Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_01330
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Entry
ECOPMV1_01330 CDS
T02847
Symbol
qseF_1
Name
(GenBank) Quorum-sensing regulator protein F
KO
K05880
transcriptional activator for dhaKLM operon
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoi03000
]
ECOPMV1_01330 (qseF_1)
Transcription factors [BR:
ecoi03000
]
Prokaryotic type
Other transcription factors
Others
ECOPMV1_01330 (qseF_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
PAS_7
AAA
AAA_5
AAA_7
AAA_16
HTH_17
ELMO_ARM
HTH_50
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
CDH64795
LinkDB
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Position
1340321..1342240
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AA seq
639 aa
AA seq
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MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAA
LEDAWEYMASRECALLILDETACILSRNGDPQTLQQLSTLGFNDGTYCAEGIIGTCALSL
AAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLA
IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA
TASQGRAITELLTLPAVLQQAIKQSHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI
LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG
KALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDSENGRLSRLELAHGGTL
FLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQ
LYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGND
FELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA
QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDVSQFKRRG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgcttttaacaacgatggtcggggcatatctcccttaattgcaacctcctgg
gagagatgcaataagctgatgaaacgggagacatggaacgtaccacaccaggcccagggc
gtgacatttgcttctatttatcggcgtaagaaagcgatgctgacgctcgggcaggctgcg
ctggaagatgcctgggaatatatggcatcgcgagagtgtgcgttgcttatcctcgatgaa
accgcctgcattctcagccgtaatggcgatccgcaaaccttgcagcaactaagtacactg
ggattcaatgacggcacgtattgcgccgagggaattattggtacttgtgcgctatcgtta
gcggctatctctggtcaggccgtgaaaacgatggccgatcaacatttcaaacaggcactc
tggaactgggccttttgcgcaacgccgttgtttgacagcaagggccgattgacgggaaca
atagcgctggcgtgtccggttgagcaaactaccgcagctgatttgccgttgacgttggca
atcgcacgcgaggtcggaaatttactgctgacggacagtttgctcgctgaaactaaccgt
catttaaatcaacttaatgccctgttagaaagtatggatgatggcgtgattagctgggac
gagcagggtaatttgcaatttatcaatgcccaggcggcgcgggtcttgcgccttgacgcg
acggcaagtcagggacgagcaatcactgaactcttaacgttacccgccgtattgcaacaa
gcaataaaacagtcacatccgctcaaacacgtagaagccacctttgaaagtcagcatcag
tttattgatgcggtgataacccttaaaccgataatagaaacgcagggaaccagctttatt
ttattgctccatcctgtggaacagatgcggcagttaatgaccagtcaattaggaaaagtc
agccataccttcgctcatatgccacaggacgatccgcaaacccgccgcttgattcatttt
ggtcgccaggcggcacgcagtagctttcctgtcctgctttgtggagaagagggcgtgggc
aaggcactgctaagtcaggcaattcataatgaaagcgagcgtgcagcggggccttatatc
gccgtcaattgtgagttatatggtgatgcggcgctggcggaagaatttattggtggcgat
cgcacggatagtgaaaatggccgtctgagtcggctggaactggcgcacggcggcacgctg
tttcttgaaaagattgaatatctggcggtggagttacagtctgccttgcttcaggttatc
aagcagggggttatcacgcgactggatgcgcggcgtttaatacccattgatgtcaaagtg
attgccacaacgaccgcggacctcgcaatgctggtggaacaaaatcgttttagtcgccag
ctgtattacgcgctgcatgcatttgaaattaccatcccgccactgcgtatgcggcgtggc
agcattccggcgctggtgaataacaaattacgcagccttgaaaaacgcttctctacgcgg
ctgaaaattgatgacgatgccctcgctcgcctggtttcctgtgcatggcctggcaacgat
tttgaactttacagcgtcatcgagaatcttgctctgagtagtgataatgggcgcattcgc
gtcagtgatttgccggaacatctgtttaccgagcaggcgacagatgatgtcagcgccacc
cgcctttccaccagtctgtcatttgcggaagttgaaaaagaggcaattattaacgcagcc
caggtcacaggcggtcgcattcaggaaatgtcggctttacttggaatcggccgcaccacg
ctgtggcggaaaatgaagcaacatggcattgatgtgagtcagtttaagcgccgtggatag
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