Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_01585
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Entry
ECOPMV1_01585 CDS
T02847
Symbol
ydcU
Name
(GenBank) Inner membrane ABC transporter permease protein ydcU
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECOPMV1_01585 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoi02000
]
ECOPMV1_01585 (ydcU)
Transporters [BR:
ecoi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECOPMV1_01585 (ydcU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CDH65031
LinkDB
All DBs
Position
1595516..1596457
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVPGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIIVRTLTMAVAVTIASAILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaacgtattgcaatcaccttcacgtccaggtctgggtaaggtgcccggtttc
ttctggcgtaatccggggctggggctgtttttgctgctgcttggcccgctaatgtggttt
ggcattgtctatttcggctcgctgctgacgctgttatggcagggcttttatacctttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaatatccgtgcgctgtttaat
ccggcgaattacgacatcattgtccgcacgctgaccatggctgtggcggtgactatcgcc
agcgccattctggcttttccaatggcgtggtatatggcgcgctataccagcggaaaaatg
aaagcgtttttttatattgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgctggcaaaagatggcgtggcgcagtggtttttacaacatctg
gggctggaaccactgctgactgcgttcctcacgctaccggcggtgggcggcaatacgctg
tcaacttccgggctggggcgctttctggtgtttctctatatctggttgccgttcatgatc
ctcccggtgcaggcggcgcttgagcgtttgccgccgtcattgttgcaggcgtcggctgat
cttggcgcacgtccacgacaaacctttcgctatgtggtgctgccgctggcaatcccgggt
attgccgctggctctatctttaccttctcactcacgctgggcgattttattgtcccgcag
ctggttggccctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattgttctcatcgcactctat
ctggcgtttgtgaaacgtctgggagcgttcgatgcactctga
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