Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_01946
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Entry
ECOPMV1_01946 CDS
T02847
Symbol
ybbH_1
Name
(GenBank) putative HTH-type transcriptional regulator ybbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoi03000
]
ECOPMV1_01946 (ybbH_1)
Transcription factors [BR:
ecoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECOPMV1_01946 (ybbH_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CDH65378
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Position
1966254..1967123
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AA seq
289 aa
AA seq
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MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT
RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR
AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV
LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR
LAQLTVIDVLATGFTLRRGTKFRDNLKRVKEALKESRFDKQLLNLSDDR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagtctcagctggaacatttgagcaaatctgagcgcaaa
gttgccgaggtcattctggcttcgcccgataacgcgatccattcgagtattgctgctctg
gcgctggaagccaatgttagcgaaccgacggtgaatcgtttctgtcgcagcatggacact
cgcggttttcctgattttaaacttcatctggcacaaagtctggcgaatggcactccctat
gttaatcgcaacgtcaatgaagatgacagcgttgaatcatacacggggaaaatatttgag
tccgcaatggcaacgctcgatcatgtccgtcattcactggataaatctgccatcaaccgc
gccgtcgacttgctcactcaggcaaaaaaaatcgcctttttcggattaggttcttcagcc
gccgttgcccacgatgcgatgaataagttctttcgttttaatgttccggtggtgtactcc
gatgatatcgtgctgcaacgcatgagttgtatgaattgtagcgacggagacgtggtggtg
ctgatttctcatactggaagaacaaaaaatctggtcgagctggcgcagctggcacgcgaa
aacgacgctatggtaattgccctcacctctgcgggtaccccgctcgcccgggaagcaacg
ctggcaattaccctcgacgtaccggaagacactgacatttatatgcccatggtttctcga
cttgcacagttgaccgtgatagatgtgctggcgacaggatttactttgcggcgcggtaca
aaattcagagataacttgaagcgggtcaaggaagcgctgaaggaatcgcgttttgataag
cagttacttaatttaagtgacgatcgctaa
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