Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_02226
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Entry
ECOPMV1_02226 CDS
T02847
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECOPMV1_02226 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoi03400
]
ECOPMV1_02226 (alkA)
Enzymes [BR:
ecoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ECOPMV1_02226 (alkA)
DNA repair and recombination proteins [BR:
ecoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECOPMV1_02226 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CDH65642
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All DBs
Position
complement(2287736..2288584)
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AA seq
282 aa
AA seq
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MYTLNWQPPYDWSWMLGFLAARAVSSVETGADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSCLFDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPDYVCFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKKLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcagcgtggaaacgggcgcggacagttattatgcccgtagtctggcg
gtaggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgctgagtgtctggcgaaaatgagctgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggattatgtctgcttccccacgcctcagcgg
ctggctgcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcactgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gacgtagaacaagcgatgaaaaaactgcaaacttttccggggatcgggcgctggacggcg
aattatttcgccttgcgcggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcacaaatccgccgttatgccgagcgctgg
aaaccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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