Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_02320
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Entry
ECOPMV1_02320 CDS
T02847
Symbol
nfo
Name
(GenBank) Endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECOPMV1_02320 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoi03400
]
ECOPMV1_02320 (nfo)
Enzymes [BR:
ecoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ECOPMV1_02320 (nfo)
DNA repair and recombination proteins [BR:
ecoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ECOPMV1_02320 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CDH65731
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Position
2394970..2395827
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AA seq
285 aa
AA seq
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MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH
YTSAQILPHDSYLINLGHPVAEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE
DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTPAECEKTFADFARIVGFKYLHGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacattggagcgcacgttagtgctgctggcggtctggcaaatgccgcaattcgc
gccgccgaaatcgacgcaaccgcgtttgccttgttcaccaaaaaccaacgtcagtggcgt
gccgcaccgctcacgacgcaaaccatcgatgaattcaaagccgcctgtgaaaaatatcac
tacacatcggcgcaaattcttccccacgacagttatctgattaacctcggacatccggtt
gctgaagctctggaaaaatcgcgcgatgcctttatagatgaaatgcagcgttgcgaacag
ctggggctttctttgctcaacttccaccctggcagccatctgatgcagatttcagaagag
gattgccttgcgcgtattgccgaatccatcaacattgcgctggataaaactcaaggtgtc
accgcggtgattgaaaacaccgccggtcagggcagtaacttagggtttaaattcgaacat
ctcgcggcgattatcgacggcgtggaagataaatcccgcgtcggcgtctgcattgatacc
tgccatgctttcgctgccgggtatgatttgcgtactcctgccgaatgcgagaaaacgttc
gctgattttgcccgtattgtaggctttaagtatctgcacgggatgcacctcaacgatgcg
aaaagcacctttggcagccgcgttgaccgccatcatagcctcggcgaaggcaatatcggt
catgatgcgttccgctggatcatgcaagacgaccgtttcgacggcattccgctgatcctt
gaaaccatcaacccggatatctgggcagaagagatcgcctggctgaaagcgcaacaaact
gaaaaagcggtggcctga
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