Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_03238
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Entry
ECOPMV1_03238 CDS
T02847
Symbol
speC_2
Name
(GenBank) Ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi00330
Arginine and proline metabolism
ecoi00480
Glutathione metabolism
ecoi01100
Metabolic pathways
ecoi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ECOPMV1_03238 (speC_2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ECOPMV1_03238 (speC_2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ECOPMV1_03238 (speC_2)
Enzymes [BR:
ecoi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ECOPMV1_03238 (speC_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CDH66600
LinkDB
All DBs
Position
complement(3326810..3328945)
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AA seq
711 aa
AA seq
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MKSMNIAASSELVSRLSTHRCVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPV
FLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFAC
PGHQHGAFFKKHPAGRHFYDFFGENIFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNP
FGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLAIIQLGTYDGTVYNARQVIDTVG
HLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG
IESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFDPGAKWHGFEGYAADQ
YFVDPCKLLLTTQGIDAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAES
HEKLAQLVAMLAQFEQHIEDDSPLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDV
KDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDANGMKRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaatattgccgccagtagtgaactggtatcccgactttctactcatcgc
tgcgtggtagcgttgggagatactgattttacggacgtcgcggcagtcgtcattaccgct
gcggatagtcgcagtggcattcttgcgttgcttaagcgcaccggttttcatctaccggtg
tttttgtattccgaacatgctgttgaattacctgcgggcgttacggcggtaatcaacggc
aacgagcagcagtggctggagctggaatccgcagcctgtcagtatgaagagaatttgctg
ccaccgttttatgacacgctgacgcagtacgttgagatgggtaatagcacctttgcttgc
cctggacatcaacatggtgcgttctttaaaaagcatcctgccggacgccatttttacgat
ttctttggcgagaacatctttcgcgccgatatgtgtaacgctgacgtaaaattgggcgat
ctgcttattcatgaaggatcggcgaaagatgcgcagaaatttgcagccaaagtctttcat
gccgataaaacctattttgtgctgaacggcacatcggcagcgaataaagtggtgacgaat
gcgctgttaacgcgtggcgatctggtgctcttcgaccgtaacaaccataagtcgaatcat
cacggcgcgttgattcaggcgggggcgacgccggtctatctggaagcttcacgtaacccg
tttggtttcattggcggtattgatgcgcactgttttaatgaagagtatctgcgccagcaa
attcgcgacgttgcgccagaaaaagccgacctgccgcgcccgtttcgcctggcgattatt
cagctgggaacctatgacggcactgtctataacgcccgtcaggtgatcgataccgttggg
catctgtgtgattacattctgtttgattccgcgtgggtcggttacgaacagtttatcccg
atgatggcggatagctcgccgctgctgttagaacttaacgaaaacgatccggggatcttt
gtgacccagtcggtgcacaaacagcaggcgggattctcacagacgtcgcagatccataaa
aaagataaccatatccgtggacaggcgcgtttttgcccgcataagcggttgaataatgcc
tttatgctccatgcttctaccagcccgttctatccgctgttcgccgcgctggacgttaac
gccaaaattcatgaaggggagagtgggcgtcggctgtgggctgagtgcgttgagttgggt
attgagtcgcgcaaggctattcttgcgcgctgtaagctgttccgcccgtttatcccgccc
gttgttgatggcaaattgtggcaggattatccgacgtcagtgttagccagcgaccgccgt
tttttcagttttgatccgggggcgaagtggcacggctttgaaggatatgccgcggatcag
tattttgttgatccgtgcaagctgttactcaccacgcagggtatcgatgccgaaaccggc
gaatatagcgattttggcgttccagcgacgattctggcgcactatctgcgtgagaacggc
attgtgccggagaagtgcgatctcaactccattctgttcttattaactccggcggaaagc
cacgagaagctggcacaactggtggcgatgctggcgcagtttgaacagcatattgaggat
gactcgccgctggctgaggtgttgccgagcgtttataacaaatatccggtgcgctatcgc
gactacaccctgcgccagttgtgtcaggagatgcacgatctgtatgtcagtttcgacgtc
aaagacctacaaaaagcgatgttccgccagcagagtttcccgtcagtggtgatgaatccc
caggatgcgcatagcgcttatattcgcggtgaagtggagttggtgcggattcgtgatgcc
gaagggcgaattgcggcagaaggggcgttgccttatccacctggcgtgctttgcgtggta
cccggggaagtctggggtggggcggttcaacgttatttccttgcgctggaagaaggcgtg
aatttgttgccgggattttcgccggagttgcaaggtgtctatagcgaaaccgatgcgaat
ggcatgaaacggttgtacggttatgtgttgaagtaa
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