Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_03385 Help Entry ECOPMV1_03385     CDS       T02847                                  Symbol rpoD Name (GenBank) Sigma-70   KO K03086   RNA polymerase primary sigma factor Organism ecoi  Escherichia coli O18:K1 PMV-1 (ExPEC) Pathway ecoi02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ecoi00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     ECOPMV1_03385 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ecoi03021]     ECOPMV1_03385 (rpoD) Transcription machinery [BR:ecoi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      ECOPMV1_03385 (rpoD) SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DNA_ligase_A_N TMEM120A-B Motif Other DBs NCBI-ProteinID:  CDH66742 LinkDB All DBs Position 3483091..3484932 Genome browser AA seq 613 aa AA seqDB search MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATH VGSELSQEDLDDDEDEDEEDGDDDTADDDNSIDPELAREKFAELRAQYIVTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD NT seq 1842 nt NT seq  +upstreamnt  +downstreamnt atggagcaaaacccgcagtcacagctgaaacttcttgtcacccgtggtaaggagcaaggc tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcag atcgaagacatcatccaaatgatcaacgacatgggcattcaggtgatggaagaagcaccg gatgccgatgatctgatgctggctgaaaacaccgcggacgaagatgctgccgaagccgcc gcgcaggtgctttccagcgtggaatctgaaatcgggcgcacgactgacccggtacgcatg tacatgcgtgaaatgggcaccgttgaactgttgacccgcgaaggcgaaattgacatcgct aagcgtattgaagacgggatcaaccaggttcaatgctccgttgctgaatatccggaagcg atcacctatctgctggaacagtacgatcgtgttgaagcagaagaagcgcgtctgtccgat ctgatcaccggctttgttgacccgaacgcagaagaagatttggcacctaccgccactcac gtcggttctgagctttcccaggaagatctggacgatgacgaagatgaagacgaagaagat ggtgacgacgataccgccgatgatgacaacagcatcgacccggaactggctcgcgaaaaa tttgcggaactgcgcgctcagtacattgtaacgcgtgacaccatcaaagcgaaaggccgc agtcacgctgccgctcaggaagagatcctgaaactgtctgaagtattcaaacagttccgc ctggtgccgaagcagtttgactacctggtcaacagcatgcgcgtcatgatggaccgcgtt cgtacgcaagaacgtctgatcatgaagctctgcgttgagcagtgcaaaatgccgaagaaa aacttcattaccctgtttaccggcaacgaaaccagcgatacctggttcaacgcggcaatt gcgatgaacaagccgtggtcggaaaaactgcacgatgtctctgaagaagtgcatcgcgcc ctgcagaaactgcagcagattgaagaagaaaccggcctgaccatcgagcaggttaaagat atcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagagatggtt gaagcgaacttgcgtctggttatttctatcgctaagaaatacaccaaccgtggcttgcag ttccttgacctgattcaggaaggtaacatcggtctgatgaaagcggttgataaattcgaa taccgccgtggttacaagttctccacctacgcaacctggtggatccgtcaggcgatcacc cgttctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagactatc aacaagctcaaccgtatttctcgccagatgctgcaagagatgggccgtgaaccaacgccg gaagaactggctgaacgcatgctgatgccggaagacaagatccgcaaagtgctgaagatc gccaaagagccaatctccatggaaacgccgatcggtgatgatgaagattcgcatctgggg gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgaaagcctg cgtgcggcaacgcacgacgtgctggctggcctgaccgcgcgtgaagcgaaagttctgcgt atgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaacagttc gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgcaaactgcgtcac ccgagccgttctgaagtgctgcgtagcttcctggacgattaa

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